Arvicola amphibius (Eurasian water vole): 119802127
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Entry
119802127 CDS
T08327
Symbol
Atxn1l
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04330
Notch signaling pathway
aamp05017
Spinocerebellar ataxia
aamp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119802127 (Atxn1l)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
119802127 (Atxn1l)
05022 Pathways of neurodegeneration - multiple diseases
119802127 (Atxn1l)
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
119802127
NCBI-ProteinID:
XP_038168975
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Position
15:36182637..36194165
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AA seq
687 aa
AA seq
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MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQTGAR
VSLGGDGTEAIAGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP
GIHYPPVHYAQLPSTSLQFIGPPYSLPYAVPPNFLPSPLLSPSANIATTHLPHFVPYASL
LAEEATPSPQAASPAQPFNKSSSAASPPGQLPHHSNTQPLDLAPGRMPIYYQMSRLPAGY
TLHETPTAGASPVLTPQEGQSALEAAAANGQRQRERNVIRRESEALDSTSSKGEGQGLVP
VVECMVDGQFSGSQTPRVEVAASAHRGTPDTDLEVQRVVGTLASQDYRVVAAQRKDEPSP
LNLSHHTLDHQGDGRGSARNPTELVEKNQARVFYPQSHQEPVKHRPLPKAVVVANGNLVP
TGTDPSLLPVGSEILVASSLDMQARATFPDKEPTPPPVTSSHLPSHFMKGAIIQLATGEL
KRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVPPE
HPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISISLQSLNSNSVSQASCAPPGQLG
TPRERPERTVLGPRDLCDSEGKIQPSGEGSRVGEPSQPEPGAQACWPAPGFQRYNMQGEE
ARAALLRPSFIPQEVKLSIEGRSNAGK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgttcatgagaggagtcaggaatgccttccaccaaagaaacgagacctccct
gtgaccagcgaggatatggggagaactacgagctgctccacaaaccacacaccttccagt
gatgcctctgaatggtcccgaggggtcgtggtggctgggcagagccagacaggagccaga
gtcagccttgggggtgatggaactgaggccatcgctggtctgacagtagatcagtatggc
atgctgtataaggtggctgtaccacctgccaccttttcaccaactggcctcccatctgtt
gtgaacatgagccccttaccccccacgtttaatgtagcgtcttcactgattcaacatcca
ggaatccactatcccccagtccactatgctcagctcccgtccacctcactgcagtttatt
gggcctccttatagccttccgtatgctgtgccacctaatttcctgcctagtcccctcctt
tctccttctgccaacattgctactactcaccttccacattttgtgccatatgcctcactc
ctagcagaagaagctactccttccccccaggctgcatccccggcccagccatttaacaaa
tcctcttctgccgcctccccacccggccagttgccacatcactcgaatactcaaccactg
gatcttgctccaggccggatgcccatttattatcaaatgtctaggctacctgctggatat
accttgcatgaaactccaacagcaggtgccagccccgttcttacccctcaggagggccag
tctgctttggaagcagctgctgccaatggacagagacagcgagagcgaaatgtaataaga
cgagaaagtgaagcccttgattccaccagcagcaagggtgaaggccaaggactggtgccg
gtggtagaatgcatggtggatggacagttttcaggttctcagactccacgagtggaggtg
gcggcgtcagcacaccgagggaccccagacaccgaccttgaagtccagcgggtagttggc
actttagcttctcaggactatcgtgtggtggcagctcagaggaaagatgaacccagccct
cttaacctatcccatcatacccttgaccatcagggtgatggacgagggtcagccaggaat
cctacagaactggtggagaaaaatcaggcccgtgtattctaccctcagtcccatcaggaa
ccagtaaaacacagacctttacccaaagcagtggttgtagccaatggcaacctggtgccc
actggaactgaccctagcctgctgcctgtgggctctgagatcctggtggcatcaagtctg
gacatgcaggccagagccacctttccagacaaggagccaacaccacctcctgttacctcc
tcccacttgccctcccatttcatgaaaggcgccatcattcagctggctacaggggagctg
aagcgggtagaggacctccaaacccaggattttgtgcgcagtgccgaagtgagtgggggg
ctgaagattgactctagcacagtcgtggacatacaggagagccagtggcctggatttgtt
atgctgcattttgtggttggtgaacagcagagcaaagtgagcattgaggtgccccccgaa
caccccttttttgtatatgggcagggttggtcctcttgcagccctggacggactgcacaa
ctcttctctcttccctgtcatcggctacaggtgggagatgtctgcatctctatcagttta
cagagcttgaacagtaactcagtttctcaggccagctgtgctcccccaggccagctgggt
acaccccgagaaagacctgagaggacagttttggggcctagagacctatgtgacagcgag
gggaagatccaaccttcaggagagggttcccgggtgggagagccctcccagcctgagcct
ggtgctcaggcctgctggccagccccaggcttccaaagatacaacatgcaaggggaggag
gcacgggctgcgctgctccgtccctctttcattccgcaggaggtgaagctgtccatcgaa
gggcgttccaatgcaggaaaatga
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