Arvicola amphibius (Eurasian water vole): 119802149
Help
Entry
119802149 CDS
T08327
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119802149 (Exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119802149 (Exosc1)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119802149 (Exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
119802149 (Exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
119802149
NCBI-ProteinID:
XP_038169017
LinkDB
All DBs
Position
1:complement(181604833..181624461)
Genome browser
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMRETE
SQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVRMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacctgtgaggtactgcatccccggcgaacgtctgtgtaacttggaggaaggc
agccccgggagcggcacatacacccggcacggctacatcttttcgtcgctggcgggctgc
ctgacgaagaccagcgagaatggcgcgctcccggtggtgtctgtgatgagagaaaccgag
tcccagctacttccagatgtaggagctgttgtcacctgtaaggtctctagcatcaactca
cgttttgccaaagtacacatcttgtatgtggggtccacaccactaaaaaatgcttttcga
ggaactatccgcaaggaagatatccgagcaactgaaaaagacaaggttgaaatttacaag
agtttccgcccaggtgacatagttttggccaaagttatctccctaggtgacgcacagtcc
aattacctgctgaccactgctgaaaatgagttaggggtagtggtagcccacagtgaatcg
ggtgtccggatggttcccatcagctggtgtgagatgcagtgccccaagacccacactaaa
gaattccggaaagtggccagggtacagcctgagttcttacaaacctaa
DBGET
integrated database retrieval system
