Arvicola amphibius (Eurasian water vole): 119802179
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Entry
119802179 CDS
T08327
Name
(RefSeq) AFG3-like protein 1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
119802179
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aamp01002
]
119802179
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
aamp03110
]
119802179
Peptidases and inhibitors [BR:
aamp01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
119802179
Chaperones and folding catalysts [BR:
aamp03110
]
Other chaperones and cochaperones
AAA proteases
119802179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_22
TIP49
AAA_2
AAA_16
RuvB_N
AAA_17
nSTAND3
AAA_14
AAA_28
AAA_33
Mg_chelatase
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
119802179
NCBI-ProteinID:
XP_038169057
LinkDB
All DBs
Position
15:49340531..49369571
Genome browser
AA seq
788 aa
AA seq
DB search
MLLRLVGAAGSRALAWPFSKLWRCGGSAGSGGAVWSSVRVGGIARQGLCSLQALQGRLTW
FSPRLCSKPPKGFEKFFKNKKNGRSTEPGNSVAPKKETVEPKNTGPGGDGGKRGGKRAGF
AWWKRMQKGEFPWDDKDFRSLAVLGAGVAVGFLYFYFRDPGKEITWKHFVQYYLSRGLVD
RLEVVNKQFVRVIPVPGTTSEKFVWFNIGSVDTFERNLESAQWELGIEPTNQAAVVYTTE
SDGSLLRSLVPTLVLVSILLYAMRRGPMGTGRGGRGGGLFSVGETTAKILKNNIDVKFAD
VAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPF
ITVNGSEFLEMFVGVGPARVRDMFAMARKNAPCILFIDEIDAIGRKRGRGHLGGQSEQEN
TLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKV
HLRPLKLDERLTKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVREKHFEQAI
ERVIGGLEKKTQVLQPSEKRTVAYHEAGHAVVGWRLEHADPLLKVSIIPRGKGLGYAQYL
PREQYLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTHSAYAQIVQFGMSEK
LGQVSFDLPRQGETMVEKPYSEATAQLIDEEVRHLVRSAYDRTLELLTQCREQVEKVSRR
LLEKEVLEKADMVELLGPRPFAEKSTYEEFVEGTGSLEEDTSLPEGLKDWNQGREEGGTE
RCLQESPA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttactccggctggtgggggcggccggcagtcgggccctagcctggcctttctccaag
ttgtggcgatgtggcggcagcgcaggaagcggcggggcggtctggagcagcgtgagggtc
ggtggcattgctcggcaggggttatgctcactgcaggctctgcagggaagactcacttgg
ttctccccaaggctgtgttcaaaacctcccaaagggtttgagaaattttttaagaataag
aagaatggaagaagtacagaaccaggaaactcagtagctccaaaaaaagaaactgtagaa
ccaaagaacactgggcctggaggagatggaggcaagagaggagggaagcgagctggcttt
gcctggtggaaacggatgcagaagggggagtttccatgggatgacaaggatttccggagt
ctggctgttctgggggcaggcgtggctgtggggtttttatatttctattttcgagatccc
ggaaaagagatcacctggaagcactttgtgcagtattacctctccagaggtctggtggat
cggctggaggttgtgaacaagcaatttgtgcgtgttattcctgtccctgggacgacatcc
gagaagttcgtgtggtttaacattggcagtgttgacacctttgagagaaaccttgagtct
gctcagtgggagctggggattgagcccaccaaccaggctgccgtagtctatactacagag
agtgatggctctcttctccgaagcctggtgcccaccctggtcctggttagcatcctcctc
tatgccatgaggaggggtccaatggggactggtcgtggcgggcgaggaggaggcctcttc
agtgttggtgagacaacagccaagatcttaaagaacaacattgatgtgaagttcgcagat
gtggctggctgtgaagaagccaagctggaaattatggagtttgtgaatttcctgaagaac
ccaaagcaatatcaggacttaggagccaagatcccaaagggagcaatgcttactggtcca
cctggaactggcaaaacacttcttgcgaaagcaactgcgggggaggccaatgtgcccttc
atcactgtgaatgggtcggagttcctggaaatgttcgttggtgttgggccagcacgggtt
cgtgacatgtttgcaatggcccggaaaaatgctccttgtattttattcattgatgagatc
gatgcgatcggcaggaagcgaggtcgtggtcacctgggaggccagagtgagcaggagaac
actttaaaccagatgcttgtggagatggacggcttcaactctaccactaatgtggtagtg
ctagctggtaccaatcgccctgatatccttgacccagccctgacacggcctggccggttt
gaccgccagatctacattggtccccctgatatcaaaggcaggtcctctattttcaaggtt
cacttgcgtccactcaagctagatgaacgcctcaccaaagatgctctttcaaggaaacta
gctgctcttactccgggtttcactggtgctgatatttccaatgtgtgcaacgaagcagca
ctgattgctgcccgccatcttagcccttctgtccgggagaagcactttgagcaagccatc
gagagggtcattggaggccttgagaagaagacccaggtcctacagcccagcgaaaagaga
actgtcgcctaccatgaggcagggcatgcagtggtgggctggcgcctggagcacgcagac
cctctgctgaaggtgtccatcatccctcggggcaaggggcttggctatgctcagtacctt
ccccgcgagcaatacctctacacgcgggagcagctcttcgaccgcatgtgtatgatgcta
gggggcagggtggctgagcagctgttctttggccagatcactacaggggctcaggatgac
ctaaggaaggtcacccacagtgcctatgctcagattgtgcagtttggaatgagcgagaag
ctgggccaggtatcctttgacctccccagacaaggagagaccatggtggagaagccgtac
agcgaagccactgctcagctcattgatgaggaggtccggcaccttgtcaggtctgcctac
gatcggaccctggaactgctcacacagtgccgggagcaggtcgagaaggtgagcaggcgg
ctcctggagaaagaagtgctggagaaggctgacatggtggagctcttggggcctcggccc
tttgcagagaagtccacctatgaggaatttgtagagggcaccggcagcctagaggaggac
acatcccttcccgaggggctgaaagactggaatcagggtcgggaggaaggaggcactgag
cgctgcttacaggagagccctgcatag
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