Arvicola amphibius (Eurasian water vole): 119802485
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Entry
119802485 CDS
T08327
Symbol
Chd2
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119802485 (Chd2)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119802485 (Chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Chromo
CHD1-like_C
Helicase_C
ResIII
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
119802485
NCBI-ProteinID:
XP_041909990
LinkDB
All DBs
Position
12:complement(145302467..145417715)
Genome browser
AA seq
1809 aa
AA seq
DB search
MMRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSEPGSGHGSESNSSSESS
ESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQDPSEDEHEQGTSAESEPELKKGKARRP
VPRRTVPKPQVKKQPKTQRGKRKKQESSMTIDDDDEAPKRQTRRRAAKNVSTREDDDFET
DSDDLIEMTGEGIDEQQDNQLXNYXKGLRIQRLGKTGATGASTTVYAVEANGDPSEAFEP
EREEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPE
DVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWM
GLPYSECSWEDEALIGKKFQNCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLG
GENLELRGLSARGSQTGFAHSWCKNNSVILADEMGLGKDHQTISFLSYLFHQHQLYGPFL
IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYE
ILLKDKTVLGQYXLAFLGVDEXHRLKNDDSLLYKTLIDFKSSHRLLITGTPLQNSLKELW
SLLHFIMPEKMLCCFRKMLKALCDEWVLSFWEDFEEDHGKGRENGYQSLHKVLEPFLLRR
VKKDVEKSLPAKVEQILRVEMSAFRKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKK
CCNHCHLIKAPEGERRGRAARMGPPDSGKGEQSPYLLSDGEDVGILLLAEYLTIITLPFQ
DFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKG
TVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDL
FKEIEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFKVANFATMEDEEELEERP
HKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQRSS
ASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARD
AELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGKGPGKRRGPTIKISGVQVNV
KSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYG
NWELIKTDPELKLTDKILPVGDRXKPQGKQLQTRVDYLLKLLRKGLEKKGTVTSGEETKL
KKRKPRVKKENKAPRQKDEHGLELSSPRHSDNPSEEGEVKDDGLEKSPMKKKQKKKENKE
NKEKPVSSRKDREGDKERKKSKDKKEKVKGGDAKSSSKSKRSQGPVHITAGSEPVPIGED
EDDDLDQETFSICKERMRPVKKALKQLDKPDKGLSVQEQLEHTRNCLLKIGDRIAECLKA
YSDQEHIKLWRRNLWILFPKFTEFDARKLHXLYKMAHKKRSQEREEQKKKDDTLGGKKPF
RPEASGSSRDSLMSQSHTSHNLHPQKPHLPASHGPQMHGHPRDNYNHPNKRHFSNADRGD
WQRERKFNYGGGNSAPWGGDRHHQYEQQHWYKDHHYGDRRHMDAHRSGSYRPNNMSRKRP
YEQYSSDRDHRGHRDYYDRHHHDSKRRRSDDFRPQNYHQQDFRRMSDHRPAMGYHGQGPS
DHYRSFHTDKLGEYKQPLPSLHTAASDPRSPPSQKSPHDSKSPLDHRSPLERSLEQKNNP
DYNWNVRKT
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaagaggaggacagttcgctacacagcaatgcatcg
agtcattcggcctctgaagaagcttctggttcagactctggcagtcagtcggaaagtgag
cagggcagcgagcccggaagtggacatggcagcgagtccaatagcagttctgaatcttct
gagagtcaatcagaatcggagagtgaatcagcaggttccaaatctcagccagtccttcca
gaagccaaagagaagcctgcctctaagaaggaacggatagctgatgtgaagaagatgtgg
gaagaatatcctgatgtttatggggttaggcgatcaaaccgaagcagacaagaaccatca
cgatttaatattaaggaagaggcaagtagcgggtctgagagcgggagtccaaaaagaaga
ggccagaggcagctgaaaaaacaagaaaaatggaagcaggacccctcagaagatgaacat
gaacaaggcaccagtgcagagagtgaaccggaactaaagaaaggaaaagctaggaggcct
gtgcccagaagaacagtgcctaaacctcaggttaaaaagcagccaaagactcagcgtgga
aagcggaaaaagcaagagtcttctatgacgattgacgacgacgatgaagctcccaaaagg
cagactcggcgacgagctgctaaaaatgtgagcactcgggaggatgatgactttgagact
gattcagatgatctcattgaaatgactggagaaggaattgatgaacagcaagataaccag
ttgtgaaactattgaaaaggtcttaggattcaaagactgggaaagacaggagccacgggg
gcatctactactgtgtatgctgttgaagctaatggagatcctagtgaggccttcgagcct
gagagggaggaaggtgaaatccagtacctgatcaagtggaagggctggtcttacatccac
agcacatgggagagcgaagagtccttacagcagcagaaagtgaagggcctgaaaaaactg
gagaacttcaagaagaaagaggatgaaatcaaacaatggttagggaaagtttctccagaa
gatgttgaatatttcaattgccaacaggagctggcctcagagttgaataaacagtatcaa
atagtagaaagagtaatagctgtgaagacaagtaaatctacattgggccaaacagatttt
ccagctcatagtcggaagccagcgccttcaaacgagcctgaatatctctgcaaatggatg
ggactgccttactcagagtgtagctgggaagatgaagccttgatcggaaagaaattccag
aattgtatcgacagcttccacagccgtaacaactccaaaaccattccaacaagagagtgc
aaggcactaaagcaaagaccacgatttgtagctttaaagaagcagccagcatacttagga
ggggagaatctggagctccgtggattatcagctagagggtctcaaactggctttgctcac
tcctggtgcaaaaataacagtgtaatccttgctgatgaaatgggcctaggaaaggaccat
cagaccatatcatttctctcctacctgttccaccagcaccagctctatggaccttttctt
atagtcgtccccttatccaccctcacttcatggcaaagggagttcgaaatctgggcccca
gagattaacgtggtggtttacataggcgacctgatgagcagaaatacgataagggaatat
gagtggattcattctcaaaccaaaaggttgaagttcaatgcacttataaccacatatgag
atcctcttaaaagataagactgtgctgggccagtattaactggccttcctgggagtagat
gaangccatcggttgaagaatgatgactctttattatataaaaccctgattgatttcaag
tccagccataggctactgatcacgggcacccctctgcagaattccctcaaggaactttgg
tccttgctgcactttattatgccggagaagatgctttgttgtttccgtaagatgttgaaa
gccttgtgtgatgagtgggttttgagtttctgggaagattttgaagaagaccatggaaag
gggagagagaatggctatcagagtcttcataaggtactagagcccttccttcttcggaga
gtcaaaaaagatgtggagaaatcccttcctgccaaagtggagcagattctcagggtggag
atgtcagccttcagaaaacagtattataagtggatcctgaccaggaattacaaggctctt
gccaaaggaacaaggggcagcacatccggctttcttaatattgtgatggagctgaagaaa
tgctgcaaccactgccacctgatcaaagctccagagggagagcggagagggagagcggcc
aggatgggtcctccagactccgggaaaggggaacagagtccttatcttctctcagatggt
gaggatgttgggatattgctgctggccgagtacctgactatcataacactacccttccag
gacttctgcttcctgctctccacacgggctggtggcctgggaatcaatctggcttcagcg
gacactgttgtcatcttcgactctgactggaacccccagaacgacttgcaggcacaagcc
cgagcacataggattggtcagaagaagcaggtgaatatttaccgcttggttacaaagggg
actgtggaagaggagatcatagagcgggccaaaaagaagatggtgttggaccatctggtg
atccagcgcatggacaccactggcaggacagttctcgaaaacaactcaggaagatccaac
tctaaccctttcaataaagaagagctgaccgctatcttgaaatttggagcagaggatctc
ttcaaagaaattgaaggagaggagtcagagcctcaggaaatggatatagatgaaattctg
cgcttagctgaaaccagagaaaatgaagtgtcaactagtgcgacggatgagcttctgtca
cagtttaaggttgccaactttgcaacaatggaggatgaagaggagctagaagagcgtcct
cacaaggactgggatgagatcattccagaagagcaaaggaaaaaagtggaggaggaggaa
cggcagaaggagctagaagaaatttatatgctgccacgaattcgtagttccactaaaaag
gctcagacaaatgatagtgattctgacacagagtctaagaggcaggctcagagatcttct
gcttctgagagtgagacggacgactctgatgacgataagaagccaaagcgcagagggcgc
ccgcgcagtgtgcgcaaagacctggtggaaggctttacggacgcagagatccggaggttc
atcaaggcttataagaagtttggtctccctcttgaaaggctggagtgcatagcacgtgat
gctgagctagtggataagtctgtggcagacctgaaacgcctgggggagctgattcataac
agttgtgtgtcagcgatgcaggaatatgaagagcagctgaaagaaaatgctagcgaaggg
aaaggaccaggcaagagaagaggccccacaatcaagatctctggggttcaggttaacgta
aagtccatcatccagcacgaggaagagttcgaaatgctgcataaatctatccctgtggac
cctgaggaaaaaaaaaaatactgcttaacctgccgggtcaaagcggcacatttcgacgtc
gagtggggcgtggaggatgattctcgtttgttgcttgggatctatgaacatggctatgga
aattgggagctaattaagacagacccagagctaaaactcactgataaaattctaccagtg
ggagacagataaaagcctcaggggaagcagttgcagacccgagtggactacttgctgaag
ctgctcaggaagggtctggagaagaagggcactgtgaccagtggggaggagaccaaacta
aagaagcggaagcctcgagtaaagaaggaaaacaaagcccccaggcagaaggatgagcat
gggcttgagctgtcatctcctcgacactcagacaacccatctgaagagggagaagtgaag
gatgatggcttagaaaaaagtccaatgaaaaaaaagcagaagaagaaagagaacaaggag
aacaaagagaaaccagtgagttctcggaaggacagggaaggagacaaagaaagaaagaag
tccaaggacaagaaagagaaggttaaaggtggtgatgccaagtcttcaagtaaatcaaag
cgatctcagggtcctgtccacattacagcaggaagtgaacctgttcccattggggaggat
gaagatgatgatctggaccaggaaaccttcagcatttgtaaagagaggatgaggcctgtg
aaaaaggcactgaagcagctggacaaacctgacaagggactcagtgtacaagaacagctg
gagcacaccaggaactgcctgctgaagattggagaccgcatagccgagtgccttaaagct
tattcggatcaggagcacatcaaactgtggaggaggaacctatggattttgtttcccaag
tttacagaatttgatgcacgaaaactacatnagttatataagatggctcataagaaaaga
tctcaagaaagagaggaacaaaagaagaaagatgatacgcttggtggtaagaaaccattt
cgaccagaggcctctggttccagccgggattctctgatgtctcagtcccatacctcacac
aaccttcatcctcagaagcctcatttgcctgcctcccatggcccacagatgcatggacat
ccaagagataactacaatcaccccaacaagagacactttagtaatgcagatcgaggagac
tggcaaagggaaagaaagttcaactatggcggtggtaacagtgcgccctggggtggtgac
cggcaccatcagtatgagcagcagcactggtacaaggatcaccactatggtgaccggaga
catatggatgcccaccgctctggaagctaccgacctaacaacatgtccagaaagagaccg
tatgagcagtacagcagtgaccgagaccaccggggacacagagactattatgacaggcac
catcacgactctaaacggaggagatcagatgattttaggccccagaattaccaccagcag
gattttcgacgaatgtctgaccacagacctgcaatgggctaccatggccagggaccctca
gaccattaccgctctttccacacagacaagttgggggaatacaaacagcccctgccctca
ttgcacactgcagcctcagatcctcgctcacccccttcccagaagtctccccatgattcc
aagtcacccttggatcacaggtctcctttggagagatcgctagaacagaaaaacaaccca
gactataactggaatgttcggaaaacataa
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integrated database retrieval system
