Arvicola amphibius (Eurasian water vole): 119802548
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Entry
119802548 CDS
T08327
Symbol
Tsku
Name
(RefSeq) tsukushi isoform X1
KO
K08130
tsukushi
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aamp00535
]
119802548 (Tsku)
Proteoglycans [BR:
aamp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
119802548 (Tsku)
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GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRR_6
LRR_5
LRR_NXF1-5
LRR_14
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
119802548
NCBI-ProteinID:
XP_038169443
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All DBs
Position
12:complement(164747034..164758267)
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AA seq
377 aa
AA seq
DB search
MSGASDSNLAFPSRGRPGARGAAMWCFLFLLLLALGGVRTTRPCFPGCQCEEETFGLFDS
FSLTRVDCSSLGPHIVPVPIPLDTAHLDLSSNRLETVNESVLAGPGYTTLAGLDLSHNLL
TSIAPTAFSRLRYLESLDLSHNGLAALPAEIFTTTSLSDVNLSHNRLREVSISAFSTHSQ
GRALHVDLSHNLIHRLLPHQPRASLSAPTIQSLNLAWNRLRVVPDLRDLPLRYLSLDGNP
LATINPGAFMGLAGLTHLSLASLQSALQLVPHGFRELPGLQVLDLSGNPKLKWAGAEVFS
GLGLLQELDLSGTSLVPLPEMLLHHLPALQSVSVGQDVQCRRLVREGAYPRHPGSSPKVV
LHCGDTQEFAARGPDIL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagcctcggactccaacctcgccttcccatcccggggacggcccggcgcgagg
ggtgccgccatgtggtgcttcctgttcctgctgctcctggcccttggcggagtgcggacc
acccggccgtgttttcccgggtgccagtgtgaggaggagactttcggcctctttgacagc
ttcagcctgactcgggtggactgtagcagcttgggcccccacattgtgcctgtgcccatc
cctctggacacagcccacctggacctgtcttccaaccggctggagacggtgaatgagtca
gtgctggccgggccgggctataccacgctggcgggcctggatctcagtcacaatctcctc
accagcatcgcgcccactgccttctcccgcctgcgctacctggagtctctcgacctcagc
cacaacggcctggcagccctgccggctgagattttcaccaccacctccctgagtgatgtc
aacctcagccataaccgactacgggaggtctcgatatctgccttctccacccacagccag
ggccgggcactgcacgtggatctgtcccacaaccttatccaccgcctgctcccccatcag
ccccgggccagcctgtctgcacccaccattcagagcctgaacctggcctggaaccggctc
cgcgttgtgccggatctccgagacctgcccctgcgttacctcagcctggatgggaacccc
ctggctaccatcaacccaggtgccttcatggggctggcgggcctcacccacctgtccttg
gccagcctacagagtgcccttcagttagtaccccatggcttccgggagctcccgggcctg
caggtcctggacttgtcaggcaaccccaagctcaagtgggcaggagccgaggtgttttcg
ggcctgggcttgctgcaggaactagatctgtcgggtaccagcctggtacccctacctgag
atgctgctccatcacctccctgctttacagagtgtcagtgtaggccaggatgtgcagtgc
cggcgcctggtgcgggagggtgcctatccccggcaccctggctccagccctaaggtagtc
ctacactgtggagacacccaggagtttgctgccaggggcccagacatcttgtga
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