Arvicola amphibius (Eurasian water vole): 119802642
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Entry
119802642 CDS
T08327
Name
(RefSeq) LOW QUALITY PROTEIN: SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040
Spliceosome
aamp04330
Notch signaling pathway
aamp05169
Epstein-Barr virus infection
aamp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119802642
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119802642
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119802642
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
119802642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamp03041
]
119802642
Spliceosome [BR:
aamp03041
]
Complex B
Other components
Prp19-related factors
119802642
Complex C
119802642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
Motif
Other DBs
NCBI-GeneID:
119802642
NCBI-ProteinID:
XP_038169623
LinkDB
All DBs
Position
12:complement(134215730..134217356)
Genome browser
AA seq
535 aa
AA seq
DB search
MALTSFLPAPTQLSQDQFEAEERARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGD
GGAFPEIHVAQYHLDMGRKKKMSNALAIXVDPEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFNINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLASDGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDQNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNEVQYDQRLFNQTKGMDS
GFAGGEDEIYVYDQAWRGGKDMAQSIYRPSKNLDKDMYGDDLETRIKTNRFVPDKEFSGS
DRRQRNREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagctttttgcctgcacccactcagctatctcaggaccaatttgaagct
gaagaaagagcaagatctcagagatcgcggcagacctctttggtctcttcacgaagagag
cctcccccgtatgggtaccggaaaggctggattccacgtttgttagaggattttggagat
ggaggtgctttcccagaaatccatgtggcccagtatcacctggatatggggcgaaagaaa
aaaatgtcgaatgcactggccatataggtggatcctgaagggaaaatcaaatacgatgca
atcgctcgacaggggcagtccaaagacaaggtcatttacagcaaatacactgacctggtt
ccaaaggaggttatgaatgcagatgacccagacctgcaaaggcctgatgaagaagctatt
aaagagataacagagaagacaagagtagccctggagaagtccgtatcacagaaggttgct
gcagccatgccagttcgtgcagctgacaagctggctcctgctcagtatatccgctacaca
ccatctcaacaaggtgtagcattcaactctggagctaaacagagagttattcggatggta
gaaatgcagaaagatccaatggagccaccaagattcaatattaataagaaaattcctcgg
ggaccaccatctcctcctgcacctgtgatgcattctcctagtcggaagatgactgtaaag
gaacagcaagagtggaagattcccccgtgtatttccaactggaagaacgcaaagggttat
acaattcctctggataagcggctggcttctgatggaagaggacttcagaccgtgcacata
aacgaaaattttgccaaactggctgaagctctatacattgctgatcggaaggctcgtgaa
gctgtggaaatgcgagcccaagtggagagaaagatggctcagaaagaaaaggagaagcat
gaagagaaacttagagaaatggcccagaaagccagagagaggagagctgggatcaaaacc
cacgtagaaaaagaggatggagaagcacgcgaaagggatgaaatccgtcatgacaggcga
aaagagagacagcatgaccagaacctttccagggcagcacctgataagaggtcaaaacta
cagagaaatgaaaatcgagatatcagtgaagtcattgctcttggcgtgcccaatcctcga
acttccaatgaagttcagtatgaccagaggctcttcaaccaaaccaagggtatggacagt
ggatttgcaggtggagaagatgaaatttatgtttatgatcaggcctggagaggtggtaaa
gatatggctcaaagcatctacaggcctagtaaaaacctggacaaggatatgtatggtgat
gacctagaaaccaggataaagaccaaccggtttgttcctgataaggagttttctggttca
gaccgtagacagagaaaccgagagggaccagttcagtttgaggaagatccttttggtttg
gacaaatttttggaagaagccaaacagcatggtggttctaaaagaccttctgatagcagt
cgccctaaggagcatgagcacgaaggcaagaagcggaggaaggagtag
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