Arvicola amphibius (Eurasian water vole): 119802702
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Entry
119802702 CDS
T08327
Symbol
Gtf2h1
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03022
Basal transcription factors
aamp03420
Nucleotide excision repair
aamp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119802702 (Gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
119802702 (Gtf2h1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119802702 (Gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119802702 (Gtf2h1)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119802702 (Gtf2h1)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119802702 (Gtf2h1)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119802702 (Gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
119802702
NCBI-ProteinID:
XP_038169716
LinkDB
All DBs
Position
12:124476720..124498786
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRNAPR
EDPVYSSSIKTFVMSQVISAENLGANRLNVNATDSSTSSYKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAETVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPMLDLTALEDKPLDEGYGICSVPSTSNSKSVKENSN
AAIIKRFNHHSAMVLAAGLRKQQAQNGQNGEPSSIDGNSGDADCFQPAIKRAKLQESIEY
EDLGNNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPNLTQ
VLSSSAASSTIAALSPGGALMQGGTQQAVNQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHSWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagtgttgctgatagtgaagaaggttcgtcagaagaagcag
gatggagcactgtacctcatggcagagagaattgcttgggcacctgaaggcaaagataga
tttacaatcagccatatgtatgcagatattaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcaacttcagctggtcctgcatgcgggggacacaacaaacttccatttttcc
aatgaaagcacagcggtgaaagaacgggatgcagtgaaggacctccttcagcagttactg
cccaagttcaagcggaaagccaataaagaactggaagaaaagaacagaaatgctccaaga
gaagatcctgtttattccagctctataaagacctttgttatgagccaagtaatcagtgct
gagaatctgggggccaatcgtttaaatgtgaatgcaacagatagttctacatctagttac
aagcaggatgttggcatttctgcagcatttctggctgatgtccggccccaaacagatggc
tgtaatggtttgagatataatttaacttctgatatcattgaatctatatttaggacctat
ccagcagtaaaaatgaaatatgcagaaactgtaccacacaacatgacggaaaaggagttc
tggacacgttttttccagtctcattattttcacagggaccgactaaatacaggatcaaag
gatctctttgcagaatgtgccaaaatagatgaaaagggattaaaaacaatggtttcatta
ggagtaaaaaacccaatgctagatttgacagctttggaagataaaccattagatgagggt
tatggcatttgctctgtgccatctacttccaattccaaatccgtaaaggaaaatagtaat
gctgccatcatcaaaaggtttaaccaccacagtgccatggtcctggctgctggtctcagg
aaacaacaagcacaaaatggacagaatggtgagcccagcagcatagacggaaattctgga
gatgcagactgctttcagccagcaatcaaaagggcgaagttacaggagtccattgaatat
gaagacttgggaaacaacaattctgtgaaaacgattgcactgaatctcaagaagtcagac
aggtattatcatggtcctactccaattcagtcattacagtatgcaacaagtcaggacatt
attaattcttttcaaagtattagacaagaaatggaagcttatacacccaacttaactcag
gttctctcaagcagtgctgctagcagcaccatcgcagccctgtcacctggaggagcactt
atgcagggagggacacagcaagcagtaaaccagatggtgccaaacgacattcagtctgaa
ttgaaacacttgtacgtggctgttggagaacttctgcggcatttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggtagtgaaaatgaagagtaatttggaacggttt
caagttacaaagctctgcccattccaagaaaagattcggaggcagtatttaagcacaaat
ctggtaagtcatatagaagagatgctgcaaacagcctacaacaagctccactcgtggcaa
tcacggcgtctgatgaagaagacgtga
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