Arvicola amphibius (Eurasian water vole): 119802763
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Entry
119802763 CDS
T08327
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03015
mRNA surveillance pathway
aamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119802763
09123 Folding, sorting and degradation
03018 RNA degradation
119802763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119802763
03041 Spliceosome [BR:
aamp03041
]
119802763
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119802763
mRNA cycle factors
Stress granule specific factors
119802763
Spliceosome [BR:
aamp03041
]
Complex C
Other components
Complex C specific factors
119802763
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_MUD2_C
RRM_5
RRM_ACIN1
RBD_DEAH11
RBD_RDR6
RRM_10
RRM_3
ApbA_C
POP1_C
Motif
Other DBs
NCBI-GeneID:
119802763
NCBI-ProteinID:
XP_038169808
LinkDB
All DBs
Position
12:complement(130279427..130281418)
Genome browser
AA seq
663 aa
AA seq
DB search
MNAAASSYTMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEDVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEMCGKALFVGRAQKKVERQAELKRKFEQLKQERIRRYQGVNLYIKN
LDDTIDDEKLRKEFSRFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERRAHLTNQYMQLLAGMRALPANAILNQFQPATGGYYMPAVPQAQGRP
PCYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAILQSGPRPALRHLAPTGNAPSSRGLPTT
TQRVGSECPDHLAMDFGGTGAAQQELTDSCQSGGIPASMQSLAPRSAVAATAPRAVAPYK
YSSSVRSPHPAIQLLQAPQPAVHVQGQEPLTASMLAAAPLQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPEYLRSKVDEAVAVLQAHHAKEEAAQMVGTAIGTAA
ATS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctacaccatggcctccttgtatgtgggcgacctgcactcg
gatgtcaccgaagccatgctatatgaaaagttcagtcctgcggggcctgtgctgtccatc
tgggtctgcagagatatgatcacccgccgctctctgggttatgcctatgtcaacttccag
cagccagctgacgctgagagagccttggacaccatgaactttgatgtgattaaaggaaag
cccattcggatcatgtggtctcagagggatccctctttgagaaagtctggtgtggggaat
gtcttcatcaagaatctggacaaatctatagacaacaaggcactttatgataccttttca
gcctttggaaacatcctgtcctgtaaggtggtttgtgatgagaatggctctaagggttat
gcctttgtccacttcgagactcaagaggctgcagacaaggccatcgagaagatgaatggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgcaaagagcgtgaa
gctgagcttggagccaaggccaaggaattcaccaatgtttatatcaaaaactttggggaa
gacgtggatgatgataacctgaaagagctattcagtcagtttggtaaaaccctcagtgtc
aaagtgatgagagatcccagtgggaaatccaaaggctttggctttgtaagttacgagaag
cacgaggatgccaataaggctgtggaagaaatgaatggaaaggaaatgtgtgggaaagcc
ctatttgtaggccgtgcacagaaaaaagtagaacgtcaagctgaattaaaacggaaattt
gagcagctgaagcaggagcgaattcgtcggtaccagggagtgaatctctacattaagaac
ttggacgacaccattgatgatgagaaattacgaaaggagttttctcgttttggatcgatc
accagcgctaaggtgatgctagaagatgggagaagcaaagggtttggctttgtctgcttc
tcgtctcctgaagaggcaaccaaagcagtcactgagatgaacggacgaattgtgggctcc
aagccactgtatgttgccctggcacagaggaaggaagagcggagggctcacctgaccaac
cagtatatgcagctactggcaggcatgagagcgctccctgctaatgccatcttaaatcag
ttccagcctgcgaccggtggctactacatgccagcagttcctcaggctcagggaagacct
ccatgttacacacctaaccaactagcacagatgaggcctaatccacgctggcagcaaggc
gggagacctcaaggcttccaaggaatgccaagtgctatacttcagtctgggcctcgtcca
gctcttcgccatctggctccaactggtaatgctccatcctctcgtggccttcctactacc
actcagagagtcgggtctgagtgccccgaccacttggctatggactttggtgggactggt
gctgcccagcaagagctgactgacagctgccagtctggaggcatccctgcgtccatgcaa
agccttgcacctcgttctgcagttgctgccactgctcccagggctgtggctccatacaag
tactcctccagtgtccgcagccctcaccctgccattcagctgctgcaggcacctcagcct
gcagtccatgttcagggccaggagccgctgactgcctcgatgctggctgcagcacccctc
caggagcagaagcagatgctgggggagcgtttattcccacttatccagacaatgcattca
aacctggctggcaagatcacaggcatgctgctggaaattgacaactcggagctgctccac
atgctggagtcccccgagtatctccgttccaaggtggatgaagctgtggcagtcctgcag
gctcatcatgccaaggaagaagctgcccagatggtgggcactgctattggtactgctgct
gctacctcttag
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