Arvicola amphibius (Eurasian water vole): 119802799
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Entry
119802799 CDS
T08327
Symbol
Mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119802799 (Mex3b)
04121 Ubiquitin system [BR:
aamp04121
]
119802799 (Mex3b)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119802799 (Mex3b)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119802799 (Mex3b)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119802799 (Mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
RING_XB3-XBAT31
zf-C3HC4
KH_2
Prok-RING_4
KH_DEAH11_2nd
zf-RING_5
zf-P11
Motif
Other DBs
NCBI-GeneID:
119802799
NCBI-ProteinID:
XP_038169873
LinkDB
All DBs
Position
12:153830810..153834943
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AA seq
578 aa
AA seq
DB search
MPSSLFADLERNGSGGGGGGGGGGGGGGGGSGGGETLDDQRALQLALDQLSLLGLDSDEG
ASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVF
VVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRV
VGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGG
IIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSS
LGSASTDSYFGGGTSGSAAATSRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGEASVPS
PDGGPELQPAFDPAPAPPPGTPLLWAQFERSPGGGSAAPVSSSCSSSASSSASSSSVVFP
GGGANSTPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAY
AAYANGLGAQLPGLPSSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALV
PCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgtttgcagacctggagcgcaacggcagcggcggcggcgggggaggc
ggcggcggcggaggcggaggcggcggtggcagcggcgggggagagactctggatgaccaa
agagccctgcagcttgcgctcgatcagctctcactgttggggctggacagtgacgagggc
gcctctctgtacgacagcgagccccgcaagaagagcgtgaacatgaccgagtgcgtgccg
gtacccagttccgaacacgtcgcggagatcgtagggcgacaaggttgtaaaatcaaagct
ttgagggcgaagaccaacacttatatcaagaccccagttcgcggggaggagcctgtcttt
gttgtgacgggcaggaaggaggatgtggccatggctcggagggagatcatctccgccgcg
gagcacttctccatgatccgagcctctcgtaacaagaacacagccctcaacggcgctgtt
cccgggccgcccaacctgccaggacagaccactatccaagtgagggtgccatatcgcgtg
gtggggctcgtggtggggccgaagggagccacgatcaagcgcattcaacagcagacccac
acatatattgtgacacccagccgggacaaggagcccgtgttcgaggtgactgggatgcca
gaaaacgtggatcgcgctcgagaggagatcgaggctcacattgcgctgcgcaccggtggc
atcatcgagctgacagatgagaacgacttccatgccaatggcacagacgtgggctttgat
ctacatcacgggtccggcgggtccggccccggcagcctctggagcaaacccaccccaagc
attactcccacccctggccgcaagcccttctccagctatcgcaatgacagctccagctcg
cttggcagcgcatctacagactcttacttcggtggtggaaccagcggcagcgccgctgcc
acttcacgcctggcggactacagccctcccagccctgcgctcagctttgcccacaatgga
aacaacaacaataacggcaatggttacacctacacagcgggggaagcctcggtgccttcc
ccggatggtggtcctgagcttcagcctgctttcgacccagctcccgccccaccacctggg
acaccccttctctgggcccagttcgagcggtcacctggaggtggatctgcagccccagtt
tcctcttcctgctcttcctcggcatcttcatctgcctcgtcgtcctcggtggtctttccc
gggggtggcgccaacagcacaccctccaatgccaacctggggctgctggtgcaccgccgg
ctgcacccgggcaccagctgcccgcgcctgtctccacccttacacatggccccaggggcg
ggagagcaccacctggctcggcgggtgcgcagcgacccgggcggtggtggtctggcctac
gcggcctatgctaatgggcttggggcacagctccccggtctgccttcgtcggacacttca
ggctcctcctcgtcctccagctcctcctccagctcttcctcctcttcctcggggctgcgg
cgcaagggcagccgcgactgctctgtgtgcttcgagagcgaagtgatcgccgcgctggtg
ccctgtggccacaacctcttctgcatggagtgtgccaaccgcatttgtgagaaaagtgag
cccgagtgtcccgtctgccacaccgcggtcactcaggccatccgcatcttttcctga
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