Arvicola amphibius (Eurasian water vole): 119802930
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Entry
119802930 CDS
T08327
Symbol
Pold1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03030
DNA replication
aamp03410
Base excision repair
aamp03420
Nucleotide excision repair
aamp03430
Mismatch repair
aamp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119802930 (Pold1)
03410 Base excision repair
119802930 (Pold1)
03420 Nucleotide excision repair
119802930 (Pold1)
03430 Mismatch repair
119802930 (Pold1)
03440 Homologous recombination
119802930 (Pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamp03032
]
119802930 (Pold1)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119802930 (Pold1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119802930 (Pold1)
DNA replication proteins [BR:
aamp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
119802930 (Pold1)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
119802930 (Pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
119802930 (Pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
119802930
NCBI-ProteinID:
XP_041909979
LinkDB
All DBs
Position
12:complement(120906464..120923896)
Genome browser
AA seq
1167 aa
AA seq
DB search
MDFKRKQGPGPGVPPKRARGGLWDEDEPSQFENLAMLEEIEDENLQEAEEELQLPPEGTV
GGQFSTGDLDPRWLRPTLRALDPNTEPLIFQQLEIDHYVGSAVPLPGGPSKSHNSVPILR
AFGVTDEGFSICCHIHGFAPYFYTPAPPGFGAEHLSDLQRELNTAISRDQRGGKELSGPA
VLAIELCSRESMFGYHGQGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYEA
NVDFEIRFMVDADIVGCNWLELPAGKYVPRAEKKATLCQLEGGMCWGSDVISHPPEGQWQ
RIAPLRVLSFGHRGIFPEPNVTLXSRSVSLGLRWGEPEPFFAPGTHCCGPDAPPYWAPKV
QSYEREEDCAPPQAWASFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFAFLGRVTG
LRSNIRDSPFQSRQVGRRESKVVSMVGRVQMDMLQVLLLREYKLRSYTLNAVSFHFLGEQ
KEDVQHSIITDCRTGNEQTRRRLAVYCLKDAYRCRFRLLERLMVLVNNVEMARVTGVPLV
VPAQPRPTGQVGSQLLRQVGGWAVLMPVVKTEGGEDXHGSHCHXPLKGYYDVPIATLDFS
SLYPSIMMAHNLCYTTRRYGPGLPRKLGLKADEFIRTPTGDEFVKSSVRKGLLPQILENL
LSARKRAKAELAQETDPLAARVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGF
GGQMIEKTKQLVESKYTVENGDNADAKVVYGDTDSVMCRXGVSPLWAEAMSLGRDAAGWV
SSHFPSPIQLEFEKVYFPYLLISKKRYAGLLFSSQPDTHDRMDCKGLEAVRRDNCPLVAN
LVTNPRYGRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHV
ELAVEVMRKAXPRQAHPAWVNRVPYVIIGAAKGVAAYMKSEVRPTWAVPLPESHFCFPLG
GRAPGPDHSASLYRVGCCAISAPPRPGLPALYFSHPGPPTGPLFVLEHSLPIDTQYYXEQ
QLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTARLEASWPLPSGRNCCIGCRSVIN
HQGAVCEFCQPRESDLYQKEVSNLNALEERFSRLWTQCQRCQGSLHEDVICTSRYCPIFY
MRKKVRKDLEDQERLCRRFGPPGPEAW
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggattttaagcggaaacaaggaccaggccctggggtgcccccaaagcgggctcgtggg
ggcctctgggatgaggatgaaccatcgcagtttgagaacttggccatgctggaggagata
gaggatgagaatctgcaggaggcagaggaggagctgcaactgcccccagagggcactgtg
ggcgggcagttttccactggagaccttgacccgcgctggctgcggcctaccctgcgtgcc
ctggaccccaacacggagccactcatctttcagcagctagagatcgaccactatgtgggc
tcagcggtgccacttccaggagggccctcaaaatcccataattccgtgcccatactgcgg
gcctttggggtcactgatgagggcttctccatctgctgccacatccacggctttgcgccc
tacttctacacccctgcacctcctggtttcggggctgagcacctgagtgacctgcagcga
gagctgaacacagccatcagccgggaccagcgtggtgggaaggagctctcggggccagcc
gtgctggccatagagctgtgctcccgtgagagcatgtttggataccatggtcagggcccc
tctccatttctccgcatcaccctggcgctgccccgccttgtggcaccggctcgccgcctc
ctggaacagggtattcgtgtgccgggcctggggaccccaagcttcgcaccctatgaggcc
aacgtggactttgagatccggttcatggtggatgctgacatcgtgggctgcaactggttg
gagctcccagctggaaagtatgttccgagggcagagaagaaggctaccctgtgtcagctg
gagggtggaatgtgctgggggtcagacgtgatcagtcacccaccagaagggcagtggcag
cgcatcgcacccctgcgtgtgctgagctttggacatcgaggcatcttccctgagccgaac
gtgaccctgtgatccagatctgtttccctggggctgcgctggggtgagccagagccattc
tttgcgcctggcactcactgctgcggccctgacgcgcccccatactgggcgccaaaagtg
cagagctatgagcgggaagaagactgtgctcccccacaggcctgggcctccttcatcctt
gccatggaccccgacgtgatcaccggctacaacattcagaactttgacctcccatacctc
atctctagggcgcaaaccctgaaggtggaccgcttcgccttcctgggccgtgtgactggt
ctccgctccaacattcgcgactctcctttccaatcaaggcaggtgggccggcgggagagt
aaggtggtcagcatggtgggtcgagttcagatggacatgctgcaggtgctgctgctgcgg
gaatacaagctccgttcctacacactcaatgctgtgagcttccacttcctgggtgagcag
aaggaggatgtgcagcacagtatcatcaccgactgcagaacgggaaatgagcagacgcgc
cgccgcctggccgtgtactgcctgaaggatgcctaccgctgccgctttcggctgctcgag
cgccttatggtgctggtgaacaatgtggaaatggcacgtgtcactggtgtgccccttgtg
gtacctgctcagccgaggccaacaggtcaagtcgggtctcaactgctgcgccaggtgggt
ggctgggctgtcctgatgcctgtggtgaagactgagggtggtgaagactagcacgggagc
cactgtcattgaccccttaaagggtactatgacgtccccattgccacgctggacttctcc
tctctatacccatccatcatgatggcccataatctgtgctacaccacacgacgctacggc
ccggggctgcccagaaagttgggccttaaagcagatgaattcatcaggacacctactggg
gatgagtttgtgaagtcctctgtgcggaagggcctcctgccccagatcctggagaatctg
ctgagtgcccggaagagggccaaggctgagctggctcaggagacggaccccttggcggcc
agggtcttggatggacggcagctggcactgaaagtgagcgccaactctgtatatggcttc
actggtgcccaggtgggcaagctgccatgtttggagatttcccagagcgtcactggattc
ggcgggcagatgattgagaaaaccaagcaactggtggagtccaagtacactgtggagaat
ggcgacaacgccgatgccaaagtggtctacggcgacactgactctgtgatgtgccgantt
ggtgtttcccctctgtgggctgaggcgatgtctctgggtcgggatgctgccggctgggta
tcaagtcacttcccatcgcctatccagctggagtttgagaaggtttactttccatacctg
ctcatcagcaagaagcgctatgctggcctactcttctcctctcagcctgacacccatgac
agaatggactgcaagggcctggaggctgtgcgcagggacaactgtcccctggtggccaac
cttgttacaaatcctcgctacggccgaatcctcgtggaccgggaccctgatggtgcagtg
gcccatgccaaagatgtcatctcagacctgctgtgcaaccgcatagacatctcccagctg
gtcatcaccaaggagctgacccgtgcagcggccgactatgcgggcaaacaggctcacgtg
gaactggctgtagaggtgatgaggaaagcgtgaccccggcaagcgcacccagcttgggtg
aaccgagtcccctatgtgatcattggtgctgccaaaggcgtggctgcctacatgaagtcg
gaggtcaggcccacctgggctgtgcccctcccagaatctcacttctgctttcctctgggc
ggtcgagcccctgggcctgaccatagtgcctccttgtacagagttggctgctgtgccatc
tccgcccctccccgccctgggttgccagccctctatttttcccaccctggcccacccaca
ggacccctgtttgtgctggagcacagcctgcccatcgacactcagtactacnctgagcaa
cagctggccaagccgctgctgcgcatctttgagcccattctgggcgagggccgtgcagaa
tccgtgctgctccgtggtgaccacacacgctgcaaaactgtgctcacagcaaggttggag
gcctcctggcctttaccaagcggtcgcaactgttgcattggctgccgctctgtgatcaac
catcaaggagctgtgtgtgagttctgtcagccgcgggagtcagatctctaccagaaggag
gtgagcaacctgaatgccctggaggagcgcttctcgcgcctctggacacagtgccagcgt
tgccagggaagcttgcatgaggatgtgatctgtaccagccgctactgtcccatcttctac
atgcgcaagaaggtacgcaaggacctggaggaccaggaacggctgtgcaggcgctttgga
cctcctggccctgaggcctggtga
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integrated database retrieval system
