Arvicola amphibius (Eurasian water vole): 119803066
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Entry
119803066 CDS
T08327
Symbol
Lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04514
Cell adhesion molecule (CAM) interaction
aamp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119803066 (Lrrc4b)
04517 IgSF CAM signaling
119803066 (Lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119803066 (Lrrc4b)
Cell adhesion molecules [BR:
aamp04515
]
Immunoglobulin superfamily
NGL family
119803066 (Lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
LRR_EndoS
DUF7617
Motif
Other DBs
NCBI-GeneID:
119803066
NCBI-ProteinID:
XP_038170227
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Position
12:120822323..120839001
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AA seq
709 aa
AA seq
DB search
MAQAHTRGSLCPLLLPGRMSWPHGALLLLWLFSPPLGAGGGGVAVTAAAGGGSPPATSCP
AACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLS
KNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAF
NRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSG
NRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT
PLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSH
FTCYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHD
GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGAGGGGPGGGAGAGGA
GGYTYFTTVTVETLETQPGEESQQPRGTEKEPPGPTTDGAWGGGRPDAAAPASASTTAPA
PRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRKQ
HQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGAGVGGDSHLALPALERDHLNH
HHYVAAAFKAHYGGNPGGGCGAKGPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcccacacccgtggttccctgtgtcccctgctgctgcctggtaggatgtcc
tggccccacggggctctcctgctcctgtggctcttttccccacccctgggagccggtggg
ggcggtgtggccgtgaccgcagctgctggaggagggtccccgccagccacctcctgcccg
gcagcctgctcctgcagcaaccaggccagcagggtgatctgcacacggagggagctggcg
gaggtgcctgccagcatccctgtcaacacccgctacctgaacctgcaagagaacagcatc
caggtgatccgcacagacacattcaagcacctccggcacctggagatcctgcagctgagc
aagaacctggtgcgcaagatcgaggtgggcgccttcaatgggctgcctagtctcaataca
ctggagctcttcgacaaccggctgaccacggtgcccacacaggccttcgagtacctgtcc
aagctccgggagctgtggctgcgcaacaaccccatcgagagcatcccatcctatgccttc
aaccgcgtgccctcactgcgccgcctggacctgggcgaactcaagcggctggagtacata
tcagaggcggccttcgaggggctggtgaacctgcgctacctcaatctgggcatgtgcaac
ctcaaggacatccccaacctcacagcgcttgtgcgcctggaggagttggagctgtcgggg
aaccggctggacctaattcgccccggctccttccagggcctcaccagcctgcgcaagctg
tggctgatgcacgcccaagtagccaccatcgagcgaaatgcctttgacgacctcaagtcg
ctggaggagctgaacctgtcccacaacaacctgatgtcgctgccacacgaccttttcacg
cccctgcaccgcctggagcgagtccacctcaaccacaacccttggcactgcaactgtgat
gtgctgtggctcagctggtggctgaaggagacggtacccagcaacaccacatgctgcgca
cgctgccacgcgcccgctggcctcaaaggccgctacatcggtgagctggaccagtcacac
ttcacctgctacgccccagtcatcgtggagccacccacagacctcaatgtcaccgagggt
atggcggctgaactcaagtgccgcacaggcacatccatgacctccgtcaactggctgaca
cctaacggcacgctcatgacgcatggttcctaccgcgtgcgcatctcagtcctgcacgac
ggcacgctcaacttcaccaatgtcaccgtgcaggacacgggccagtacacatgcatggtc
acaaactcggccggaaacaccactgcctcagccacgcttaatgtgtcggctgtggaccca
gtggctgcagggggggctgggggcgggggtcccgggggtggggccggtgccgggggcgcg
ggtggctacacttacttcaccacggtgaccgtggagacgctggaaacacagccgggtgag
gagtcccagcaaccccggggtacagaaaaggaacccccggggcccacgactgacggagcg
tggggcggtggccggcctgatgccgcagccccggcctcggcgtccaccacagcgccggcc
ccacgttcctcgcggcccacggagaaggcgttcacggtgcccatcacggatgtaacggag
aacgcgcttaaggacctagacgacgtcatgaagaccaccaaaataatcattggctgcttc
gtggccatcaccttcatggccgctgtgatgctggtggccttctacaagctgcgcaagcag
caccagctgcacaagcaccacgggcccacgcgcactgtggagatcatcaatgtggaggac
gagcttcccgccgcctccgccgtgtcggtggccgcggccgctgcggtagccggaggcgcg
ggcgtgggcggggacagccacctggcccttccggcgctggagcgagaccacctcaaccac
caccactacgtggccgccgccttcaaggcacactacggcggcaacccaggaggcgggtgc
ggggccaagggtcccggcctcaactccatccacgaacctctgctcttcaagagtggctcc
aaggagaatgtgcaagagacacaaatctaa
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