Arvicola amphibius (Eurasian water vole): 119803233
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Entry
119803233 CDS
T08327
Symbol
Cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119803233 (Cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119803233 (Cnot2)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119803233 (Cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119803233 (Cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119803233
NCBI-ProteinID:
XP_038170317
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Position
17:complement(29466756..29557568)
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AA seq
550 aa
AA seq
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MRTVRKGHDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMF
PHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNAPQLNRSLSQGTQLPSHV
TPTTGVPTMPLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSS
PSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDF
PALADRSRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKD
PTSSNDDSKSNLNTTGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacacgactctatggtgaggactgatggacatacattatct
gagaaaagaaactaccaggtgacaaacagcatgtttggtgcttcaagaaagaagtttgta
gagggggtggacagcgactaccatgatgagaacatgtactacagccagtcttctatgttc
ccacatcggtcagagaaagatatgctggcatcaccatctacatcaggtcagctgtctcaa
tttggggcaagtttatacgggcaacaaagtgcattaggccttccaatgagggggatgagc
aacaatgcccctcagttaaatcgcagcttatcacaaggcactcagttaccgagccacgtc
acgccaacaacaggggtaccaacaatgccacttcacacgcctccatctccaagcaggggt
attttgcctatgaatcctaggaatatgatgaaccactcccaggttggtcagggcattgga
attcctagcaggacaaatagcatgagcagttcagggttaggtagccccaacagaagctcg
ccaagcataatatgtatgccaaagcagcagccttctcgacagccttttactgtgaacagt
atgtctggatttggaatgaacaggaatcaggcatttggaatgaataactccttatcaagt
aacatttttaatggaacagatggcagtgaaaatgtgacagggttggacctgtcagatttc
ccagcattagcagaccgaagtagaagggaaggaagtggcaaccccaccccattaataaac
cccttggccggaagagcaccttacgttggaatggtaacaaaacctgcaaatgagcaatcc
caggacttctcaatacacaatgaagactttccagcattacctggttccagctataaagac
ccaacgtcaagtaatgacgacagcaaatctaatttgaatacaacggggaagacgacttca
agtacagatggacccaaattccctggagataaaagttcaacaacacaaaacaataatcag
cagaaaaaggggatccaggtgttacctgatggtcgagttactaacattcctcaagggatg
gtgacggaccaatttggaatgattggcttgttaacatttatcagggcagcagagacagac
ccaggaatggtacatcttgctttaggaagtgacttgacaacattaggcctcaatctgaac
tctcctgaaaatctctaccccaaatttgcatcaccctgggcatcttcgccttgtcggcct
caggacatagacttccatgttccatctgaatatttaacgaacattcacattagggataag
ctggctgcaatcaagcttggccgatacggagaagacctcctcttctatctctattacatg
aatggaggagatgtgttacaactcttagctgcggtagagctttttaaccgtgattggaga
taccacaaagaagaacgggtgtggattaccagagcaccaggcatggagcccactatgaaa
accaatacatatgagaggggaacatattacttctttgactgtctgaactggaggaaagta
gctaaggagttccatctggaatatgacaaattagaagaacggcctcacctgccatccacc
ttcaactacaaccctgctcagcaagccttctaa
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