Arvicola amphibius (Eurasian water vole): 119803286
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Entry
119803286 CDS
T08327
Symbol
Prdm4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
119803286 (Prdm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119803286 (Prdm4)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119803286 (Prdm4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_16
SET
zf-met
zf-C2H2_jaz
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
119803286
NCBI-ProteinID:
XP_038170394
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Position
17
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AA seq
796 aa
AA seq
DB search
MNDMNLSPVGMEQLSSSSVSNALPVSGSHLGLAASPSHSAIPAPGLPVAIPNLGPSLSSL
PSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTLLPGILSYLADRPPPQY
IHPNSINVDGNTALSITNSPSALDPYQANGNVGLELGVVSIDSRSVNTHGAQSLHPNDGH
EVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGDHSQIPNGSRSHEPLSVDSVGNNL
TADTVGHGGVIPIHGSGLELPVVMETDHIANRVSGMSDNALSDSIHTVAMSTNAVSVALS
TSHSLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLAFVPPSLQMEDSNS
NKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRPSIVGTE
VGVWTAETIPVRTCFGPLVGQQSHSMEVAEWTDKAVDHVWKIYHNGVLEFCIITTDENEC
NWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQIGVPEHPDV
HLCNCGKECNSYSEFKAHLTSHIHSHLPGQGHSSSHGPSHSKERKWKCSMCPQAFISPSK
LHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAHLESH
MVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKHLNSH
EGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPASSSSAQEEEEDDSEEDDLTDSVRTDDCR
IGSAVYSADEPLPTHK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaatttgagcccagtggggatggagcagctgtcttcatcctctgtgagc
aatgccctgccagtctcaggaagtcacctgggtttggctgcctctccctctcacagcgcc
atccctgccccaggtctcccagtggcaattccaaacctgggtccctccctgagctctctg
ccttctgccttgtcactgatgctacccatgggcattggagatcgaggggtgatgtgtggg
ttacccgaaagaaactacaccctacctccaccgccttaccctcacctagagagcagttac
ttcagaacccttctacctggcattttatcttacttggctgacagaccgcctcctcagtac
atccaccccaactctataaatgttgatggtaatactgcgttgtctatcaccaacagccct
tcagcactagatccttatcaggccaatgggaatgttggattagaattaggtgttgtttca
atagactctcgttctgtgaacacacatggtgcccaaagtcttcatcctaatgatggccat
gaagtggcattggacacaacaatcactatggagaatgtttctagggttaccagcccaatc
tctacagacggaatggcagaggagcttacaatggatggtgttgcaggagaccattcgcaa
atccccaatggctccagaagtcatgaacctctctctgtggattctgtgggcaacaacctg
acagcagacactgtaggacatggtggtgtgatacccattcatgggagtggtctagagctt
cctgtggtcatggagacagaccacattgcaaatcgggtcagtgggatgtctgacaacgcc
ctcagtgactccatccacactgtggccatgagcaccaacgctgtaagcgtggcactctct
acctcacacagccttgcctctctagaatccgtttccctccatgaagttggccttagcctg
gagcctgtggctgtctcttccatcacgcaggaggttgctatggggacaggtcatgtagat
gtatcctcagacagcttggctttcgtaccaccttcgctgcaaatggaagactccaattca
aacaaggaaaacatggcaaccttgtttacaatttggtgcactctctgtgaccgagcctac
ccctcagactgccctgatcacggcccagtgacttttgttcctgacacaccaatagagagc
agagcaaggctgtccctcccaaagcaacttgttctccgcccatccattgtgggaacagaa
gttggtgtatggactgcagaaaccattcctgtgcggacttgctttgggcctctagttggt
cagcagagtcactccatggaagtggcagagtggacagacaaggcagttgaccatgtctgg
aagatctaccacaatggtgtcctagaattctgcatcattacaactgatgagaatgagtgt
aactggatgatgttcgtgcgcaaagccaggaaccgtgaagaacaaaatttggtggcttat
ccccatgatggaaaaatctatttctgtacctcacaagacatcccccctgaaaacgaactg
ctattctattatagccgggattatgctcaacagattggtgttcctgaacacccagatgtg
cacctctgtaactgtggcaaggagtgcaattcctattctgagttcaaagctcatctgacc
agccacatccatagccatctccctggccagggccacagcagcagccacgggccaagccac
agcaaggaaaggaagtggaagtgttccatgtgcccccaggcttttatctctccttccaaa
ctccacgttcactttatgggtcatatgggcatgaagccccacaagtgtgatttttgtagc
aaggcttttagtgatccgagcaacctgcggacacacctcaaaattcatacaggtcagaag
aattacaggtgtactttgtgtgacaagtctttcacccagaaggcccacctagagtcccac
atggtcatccacacgggtgagaagaatctcaagtgtgattactgtgacaagctgtttatg
cggaggcaggacctcaagcagcatgtgctcatccacacacaggaacgccagatcaagtgt
ccgaagtgtgataaactgttcttgagaacaaaccacttgaagaagcatcttaattctcat
gaaggaaaacgagattatgtctgtgagaaatgtacgaaggcttatctaaccaagtaccac
ctcactcggcacctgaagacctgcaaagggcccgcctccagttcctcggcacaggaggag
gaggaggatgactctgaagaagatgacctcacagactccgtgagaacagacgactgtagg
attggcagtgccgtttactcagcagatgagcctctccccacacataaatag
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