Arvicola amphibius (Eurasian water vole): 119803427
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Entry
119803427 CDS
T08327
Symbol
Fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03030
DNA replication
aamp03410
Base excision repair
aamp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119803427 (Fen1)
03410 Base excision repair
119803427 (Fen1)
03450 Non-homologous end-joining
119803427 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamp03032
]
119803427 (Fen1)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119803427 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119803427 (Fen1)
DNA replication proteins [BR:
aamp03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
119803427 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
119803427 (Fen1)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
119803427 (Fen1)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119803427 (Fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
XPG_I_2
DUF3560
HHH_5
Motif
Other DBs
NCBI-GeneID:
119803427
NCBI-ProteinID:
XP_038170662
LinkDB
All DBs
Position
1:complement(152774794..152780325)
Genome browser
AA seq
380 aa
AA seq
DB search
MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET
TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGVE
EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESIRG
IGPKRAVDLIQKHKSIEEIVRRLDPNKYPIPENWLHKEAQQLFLEPEVLDPESVELKWSE
PNEEELVKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFKVTGSLSSAKRKEPEP
KGPAKKKVKTGGAGKFKRGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcaaggccttgccaaactaattgctgatgtggctcccagtgccatccgggag
aatgacatcaagagctacttcggtcgcaaggtggccattgatgcctctatgagcatttac
cagttcctgattgctgtccgtcagggtggggatgtgctgcagaatgaggagggggagacc
accagccacctgatgggcatgttctaccgtaccatccgcatgatggagaatggcatcaag
cctgtatatgtctttgatggcaaaccaccacagctgaagtcaggtgagctggccaaacgc
agtgagaggcgcgccgaggccgagaagcagctgcagcaggctcaggaggctggggtcgag
gaggaggtggaaaagttcacaaagcggctggtgaaggtaaccaagcaacacaatgacgag
tgcaaacacctgctgagtctcatgggcatcccataccttgatgcacccagcgaggcagag
gccagctgcgctgccctggtgaaggctggcaaagtctatgctgcagccaccgaggacatg
gactgcctcacttttggcagccctgtactaatgcgacatctgactgccagtgaggccaag
aagctgcccatccaggagttccacctgagccgagtcctgcaggagctgggtctgaaccag
gagcagtttgtggatctgtgcatcctgctgggaagtgactactgtgagagcatccggggc
atcgggcccaagcgggctgtggacctcatccagaagcataagagcatcgaggagatcgtg
cggcggctggaccccaacaagtaccccattccagagaactggctccacaaagaagcgcag
cagctcttcctggagcccgaggtgctggacccagagtctgtggagctgaagtggagcgag
ccgaatgaagaggagttggtcaaatttatgtgtggtgaaaagcagttttctgaggagcga
attcgcagtggggtcaagcggctgagtaagagccgccagggcagcacccagggccgtctt
gatgatttcttcaaggtgaccggctctctctcctccgccaagcgcaaggagccagaaccc
aagggacccgctaagaagaaagtaaagactgggggagctgggaagtttaaaaggggaaaa
taa
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