Arvicola amphibius (Eurasian water vole): 119803789
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Entry
119803789 CDS
T08327
Symbol
Als2
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05014
Amyotrophic lateral sclerosis
aamp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119803789 (Als2)
05022 Pathways of neurodegeneration - multiple diseases
119803789 (Als2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119803789 (Als2)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
119803789 (Als2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
RCC1_2
VPS9
RhoGEF
PH
CCDC47
Motif
Other DBs
NCBI-GeneID:
119803789
NCBI-ProteinID:
XP_038171118
LinkDB
All DBs
Position
18:complement(32306493..32366472)
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AA seq
1651 aa
AA seq
DB search
MDSKKKSSAEAEGSKERGLVHVWQAGSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDG
EVYSFGTLPWKSESAEVCPSSPLLESALVGHHVVTVATGSFHSGAVTESGAVYMWGENAA
GQCAVANQQYVPEPSSVSISDSETSPLLAVRILQLACGAEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPPQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQAENHTSTATSPQTEALDGPGEVFENALVETELN
VGNVQATNGNAVPSQQNVAGTAEVSSAKTAPSYPDTQAVTAYLQKLSEQPGPENHEQEEK
PPQVQPPVEEAGPDLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYS
TAPGETGAQSGSAPTGPESLKDLREEQVKQESMQGKKSSSLVDIREEEAEGGSRRLSLPG
LLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLP
RLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKV
SSENGVWSVAAGQDYSLFLVDTKDFQPGLYYSGRQDPAEGDTLPENPGGTKTPVLLSCNK
LGYISRVTAGKDSYLALVDKNIMGYIASLHELATTERRFYSKLSEIKSQILRPLLSLENL
GTVTTVQLLQEVASRFSKLCYLIGQHGASLSSFLQGVKEARSLVIMKHSSLFLDSYTEYC
TSVSNFLVMGGFQLLAKPAMDFLNKNQELLQDLSEVNEENTQLMEILNTLFFLPVRRLHN
YAKVLLKLATCFEVASPEYQMLQDSSSCYESLALHLGRKRKEAEYTLGFWKTFPGKMTDS
LRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWAEPLSE
EAGSVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGTSDFPLYGGGSGVQRQ
EPPISRSAKYTFYKDPRLKDATYDGRWLSGKPHGRGVLKWPDGKVYSGMFRNGLEDGYGE
YRIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSS
SPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEGNFHLNK
MAGNGVLLSEDDTVYEGEFSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKITGTYFKP
GLYESDRDKPKALRKLGNLAVAADEKWRAVFDECWRQLGCESPGQGEVWKAWDNIAVALT
TSRRQHRDSPEILSRSQTQTLESLEYIPQHVGAFSVEKYDDIRKYLIKACDTPLHPLGRL
VETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRFLFPELPEEGSTIPLSAPQ
PTGRRSFCTGRSDSGSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALDNDREEDVYWE
CVLRLNKQPDLPLLGFLGVQRKFWPATLSILGESKKVLPTTKDACFASAVECLQQISTTF
TPSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLIED
LMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggactcgaagaagaaaagctcagcagaggcagaaggatccaaagaaagaggcctggtc
cacgtctggcaggcaggatccttttctctaacaccggagaggttgccaggctggggagga
aagacagttcttcaggcagccctgggtgtgaaacacggagttcttctgactgaagatggt
gaggtctacagctttgggaccctgccctggaaaagcgagtcagcggaagtctgtccaagc
agcccccttctagaaagtgccctggttgggcatcatgttgtcacggtggccacggggagc
ttccacagcggagcggtgacagaaagcggggcggtgtacatgtggggggagaacgccgcc
ggccagtgtgcagtagcgaaccagcagtatgtgccagaaccaagttctgtcagcatttct
gactcagagaccagccccttgttagccgtgaggattctgcagttggcgtgtggcgcggag
cacaccctggccttgtcaatcagcagagagatctgggcatggggcaccggctgtcagctg
ggtctcatcaccaccaccttcccagtgacaaagccccagaaggtggaacaccttgccggg
cgcgtggtgctccaggtggcctgtggagcgttccacagcttggcactggtgcagtgcctc
cctccccaggatctgaagcccgtcccggagagatgcaaccagtgcagccagctgctcatc
actatgacggacaaagaggaccatgtgataatatcagacagccactgctgccccttaggg
gtgaccctgtctgagtcccaagcagaaaatcacaccagcactgccaccagccctcagacg
gaggcactggacggtccaggagaggtgtttgagaacgctttggtagaaactgaactgaac
gtgggaaacgttcaggccacaaatggcaatgcagttccctctcagcagaacgtggctggg
acagccgaagtgtcttcagccaaaacagctccctcctaccccgacacccaggcagtaact
gcgtacctgcagaagctgtcagagcagccagggccggagaaccacgagcaggaagaaaag
ccaccccaggtccagcctcctgtagaggaagctggccctgaccttcacagtccaccaacc
acaagcacctcagccctcaacagcctggtggtctcctgtgcgtctgctgttggtgtgaga
gtggccgccacctacgaggctggggccttgtctctcaagaaagtcatgaacttttacagc
actgcccctggggagacgggagcccagtcgggcagcgctcccacaggcccagaaagcctg
aaagatctcagagaagagcaggtgaaacaggagtcaatgcaagggaagaaaagctccagt
ctggtggacatcagagaggaagaggcagagggagggagccgaagactctccctcccggga
ctgctgtctcaagtttcccccaggctcttaaggaaagctgcaagggtgaaaaccaggacc
gtggtcctgactcccacatacagcggagaagccgatgccctcctgccgtccctgagaaca
gaggtgtggacctgggggaaaggcaaggaaggacagctggggcacggtgacgtcctgccc
aggcttcagccgctgtgtgtcaagtgtctggacggtaaagaggtgattcacctggaggca
ggtggctcccactcccttgcacttactgcgaagtctcaggtctactcgtggggcagtaac
accttcggtcagcttgggcattctgactttccaaccacagtccctcggctcgccaaggtt
agcagtgaaaacggagtctggagtgtagccgcaggccaggattactccttgtttctagtg
gacaccaaagacttccagcctgggctgtattacagtggccgacaggaccctgcagaaggt
gacacccttccggagaatcccggtggtaccaagactcccgtccttctctcctgtaacaag
ctcggatatataagcagagtaacagcaggaaaagatagttatctcgccctggtggacaag
aacatcatgggatatatcgccagtctccatgaattggctactacggaaagacggttttac
tcaaaactaagtgaaatcaaatctcagatacttcggcctcttctcagtttagaaaatttg
ggcactgtgaccactgtccagctgttgcaggaagtcgcaagtcggttcagcaagctgtgt
tacctcattgggcagcacggggcgtcgcttagcagcttcctgcagggcgtgaaggaagcc
aggagcctggtcatcatgaagcactcgagtcttttcttggacagttacacagagtactgc
acatcagtctcaaatttcctggtgatgggaggattccagctcctcgcgaagcctgccatg
gatttcctaaataaaaaccaagaactcctacaagatttgtcggaagtgaatgaagagaac
acccagttgatggaaatactgaacacactgtttttcttgccagtcaggcgacttcataat
tacgccaaggttttgctgaagcttgccacctgctttgaagtggcatctccagaatatcag
atgctgcaggattccagttcttgttatgaatctcttgctctccatctcggcaggaagagg
aaggaagcagagtacacgctgggcttctggaagacttttcccgggaaaatgacggactcc
ctgcggaagccggagcgcagactgctgtgtgagagcagtaaccgggcattgtcgctgcag
cacgcgggcaggttctccgtgaactggttcatcctcttcaacgacgccctggtccacgct
cagttctccacgcatcacgtgttccctttggccacactgtgggcagagcctctttccgaa
gaagctggtagcgtgaacggcttgaagataaccacacctgaagagcagttcacgctaatc
tcatcaacaccccaggaaaagaccaagtggcttcgggctatcagccaagccgtggatcag
gctttgagggggacatccgattttccactctatggaggtggcagcggtgttcagaggcag
gaaccacccatctcaagaagcgccaagtacactttctacaaggatcctcgcctgaaggat
gccacttacgacgggcgctggctttcggggaagcctcatggcaggggtgttctgaagtgg
ccggatggaaaggtgtattctggcatgttcaggaatggcctggaagatggatatggtgaa
tacagaatcccaaacaaggccctgaacaaagaagaccattatgtgggccactggaaagaa
gggaaaatgtgtggccaaggggtctacagctacgcctccggtgaagtgtttgaaggctgc
tttcaggataacatgcgccacggccatggtctcctccgaagtgggaaactgacttcttct
tctcctagcatgttcattggccagtgggtgatggataagaaggcaggatacggcgtcttt
gatgacatcaccaggggagagaagtacatgggaatgtggcaagatgatgtgtgccaagga
aatggggtggtagttacccagtttgggttatattatgaaggcaacttccacctgaataag
atggcgggaaatggagttttgctttcagaagatgacactgtctacgaaggggaattttcc
gacgactggaccctcagtggaaagggcacactgaccatgccaaacggagactacattgaa
ggttattttagtggagaatgggggtctgggataaagatcaccggaacctacttcaaacct
ggcctctacgagagtgacagagacaagcccaaagccctcaggaagctgggaaacttggcg
gtggccgcggatgagaagtggagagccgtgtttgatgagtgctggcgccagctgggctgt
gagagcccaggccaaggggaggtgtggaaggcgtgggataacattgccgtggccctgacc
accagtcgccgccagcacagggacagtccggaaatcctgagccgttcacagactcagacg
ctagagagtctggagtacattccccagcatgtgggcgccttctctgtggagaaatatgac
gacatcagaaagtatttaatcaaggcctgtgacaccccgctgcacccactgggcaggctt
gtggagaccttggtggcggtgtacagaatgacatacgtgggcgtgggggccaaccgccgg
ttactgcaggaagctgtgaaggagattaagtcctatctcaagcggatcttccagcttgtg
aggttcttatttcctgagcttcctgaagagggcagcacaattcctctgtctgctcctcag
cctactggaaggaggtccttctgcactgggaggtcagattccggatctgagtccccagag
ccagggtatgtggtaaccagttccggcttgctgctccctgtgctgctgcctcgcctctac
ccccctctcttcatgctgtacgccctggacaacgaccgagaggaggacgtttactgggag
tgtgtgctccgactaaacaagcagccggacctccctctcctgggcttccttggggtgcag
aggaaattttggccagcaaccttgtcaatccttggagagagcaaaaaggttttgcccacc
acaaaggatgcttgttttgcctctgccgtggaatgcctccagcagatcagcacaacattc
actccgtcagacaagctcaaggtcattcagcagaccttcgaggagatctcccagagtgtc
ctggcctccctgcaggaggacttcctgtggtccatggacgacttgttccccgtcttcttg
tatgtggtgctacgggccaggattaggaatttaggctctgaagtccacctcattgaggac
ctgatggacccctatctccagcacggcgagcaaggcataatgttcaccaccctgaaggct
tgttactaccagattcagcgtgagaagcttaactag
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integrated database retrieval system
