Arvicola amphibius (Eurasian water vole): 119804053
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Entry
119804053 CDS
T08327
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp02010
ABC transporters
aamp04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119804053
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
119804053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119804053
Enzymes [BR:
aamp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
119804053
Transporters [BR:
aamp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
119804053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
Zeta_toxin
RsgA_GTPase
AAA_5
AAA
G-alpha
AAA_29
AAA_28
DUF87
APS_kinase
SbcC_Walker_B
AAA_14
AAA_7
AAA_15
DUF815
nSTAND1
nSTAND3
NTPase_1
Peptidase_MA_2
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
119804053
NCBI-ProteinID:
XP_038171520
LinkDB
All DBs
Position
18:12937938..12991319
Genome browser
AA seq
1281 aa
AA seq
DB search
MDLEAARNGTARRPGTVEGDFELGSISNQGKDKKKKVNLIGPLTLFRYSDWQDKLFMLLG
TVMAIAHGSGLPLMMIVFGEMTDKFVDNAGNLALPVNFSLSMINPGRILEEEMTRYAYYY
SGLGGGVLIAAYIQVSFWTLAASRQIKKIRQHFFHAILRQEMGWFDIQGTTELNTRLTDD
ISRISEGIGDKVGMFFQAIATFFAGFIVGFLRGWKLTLVIMAISPILGLSTAVWAKILST
FSDKELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYQKHLENAKKIGIKKAISANIS
MGIAFLLIYASYALAFWYGSTLVISKEYTIGNAVTVFFSILIGAFSVGQAAPCIDAFANA
RGAAYVIFDIIDNNPKIDSLSEKGHKPDSIKGNLDFSDVHFSYPSRANIKILKGLNLKVQ
SGQTVALVGNSGCGKSTTVQLLQRLYDPTEGTISIDGQDIRNFNVRYLREIIGVVSQEPV
LFATTIAENIRYGRDNVTMEEIKKAVKEANAYEFIMKLPQKFDTLVGDRGAQLSGGQKQR
IAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTVRNADVI
AGLEDGVIVEQGSHRELMEKEGVYFKLVNTQTSGSHSLSAEFEVELSEEKAASGMAPNGW
KSHLFRSSTKKSLKSSRAHQHRLDADASELDADVPPVSFLQVLKLNQTEWPYFVVGTVCA
IVNGALQPAISIILSEMIAIFGPGDDAVKQQKCNMFSLIFLGLGVLSFFTFFLQGFTFGK
AGEILTTRLRSMAFKAMLRQDMSWFDDYRNSTGALSTRLATDAAQVQGATGTRLALIAQN
TANLGTGIIISFIYGWQLTLLLLSVVPFVAVSGVVEMKMLAGNAKRDKKELEAAGKIATE
AIENIRTVVSLTQERKFESMYVEKLHGPYRNSVRKAHIYGATFSISQASVYFSYAACFRF
GAYLVVNGHMRFKDVILVFSAIVFGAVALGHASSFAPDYAKAKLSAAHLFSLFERQPLID
SYSGEGLWPDKFEGSVTFNEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTV
VQLLERFYDPRAGTVLLDGQEAKKLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRV
VSQDEIERAAKEANIHPFIETLPQKYETRVGDKGTQLSGGQKQRIAIARALVRQPRVLLL
DEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEQGTHQQ
LLAQKGIYFSMVHIQAGAQNL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggcagcaaggaacggaacagcgcggcgccccgggacagtggagggcgac
tttgaactaggcagcatcagcaaccaaggcaaggataaaaagaagaaagtgaatttaatt
ggaccattgacactgttccgatactctgactggcaggataaattgtttatgctcctgggc
accgtcatggccatagctcacggatcaggtcttcccctcatgatgatagtctttggagaa
atgacagataagtttgtagataatgctgggaacttggccttgccagtaaatttttcattg
tcaatgataaatccaggaagaattctggaagaagaaatgactagatacgcctattactac
tcgggactaggtggtggagtccttattgctgcctacatccaagtttcgttctggactttg
gcagctagtcgacaaataaagaagatcagacagcatttttttcatgccatcctccgacaa
gaaatgggctggtttgacatccagggcacgactgaactcaatacgcgcctgacagatgac
atctccagaatcagtgaaggaattggtgacaaggttggaatgttctttcaagcaatagcc
acgttttttgcaggcttcatagtggggtttctcagaggatggaagctcacactggtgatc
atggcaatcagccccatcctggggctctctacagctgtgtgggcaaagatcctctcaaca
ttcagtgacaaagaactagctgcgtatgcaaaagcaggtgctgtggctgaggaggctctg
ggagccatcaggaccgtgatagctttcgggggccagaacaaagaactagaaaggtatcag
aaacatttagaaaatgccaaaaaaattggaataaaaaaggctatctcagcaaacatatcc
atgggcatcgccttcttgttaatatatgcatcctacgcactggccttctggtatgggtcc
actctggtcatctcaaaagagtatactattggaaatgcagtgaccgtgttcttctcaatc
ctcattggagctttcagtgtggggcaggctgccccctgtattgatgcctttgccaatgca
cgaggagcagcttacgtgatctttgacattattgataacaatcctaaaattgacagtctt
tcagagaaaggacacaaaccagacagcatcaaaggaaatttggacttcagtgatgttcac
ttttcctatccatctcgggctaacatcaagatcttgaagggcctcaacctgaaggtgcag
agcggacagacagtggccctggtgggcaacagtggctgtgggaagagcaccacggtccag
ctgctgcagaggctgtacgaccccacagagggtacgattagcattgatgggcaggacatc
cggaacttcaatgtcaggtacctgcgggaaatcattggagtggtgagtcaggagccggta
ctgtttgctaccacgatcgccgagaacattcgctatggccgtgacaatgtcaccatggag
gagataaaaaaagctgtcaaagaagccaatgcttatgagttcatcatgaaattaccacag
aaatttgacaccctggttggtgatagaggggcgcagctgagtggaggacagaaacagaga
atcgccattgctcgtgccctggtccgcaaccccaagatcctcctgctggacgaagcgacg
tcagccttggacacagaaagtgaagctgaggtacaggcggctctggataaggctagagaa
gggcgaaccaccattgtgatcgctcatcgactgtctacagtcagaaacgcagacgtcatc
gctgggcttgaggatggcgtcatcgtggagcaaggaagtcacagggagctgatggagaag
gaaggtgtctacttcaaactcgtgaacacgcagacatcaggaagccacagcctgtcagca
gaatttgaagttgaactaagtgaagagaaggctgcaagcggcatggcccccaacggctgg
aaatctcacttattcaggagctctacgaagaaaagtcttaaaagttcaagagcgcatcag
cacaggctagatgcagacgccagtgaactcgatgccgatgtgccaccagtgtcttttctg
caagtcttgaaactgaatcaaacggagtggccctattttgtggtgggaaccgtctgtgcc
attgtcaacggggccctccagccggccatctccatcatcctgtcagagatgatagctatc
ttcggccccggggacgatgcagtgaagcagcagaagtgtaacatgttctcactgatcttc
ttgggcctgggagtcctttcattctttaccttcttccttcagggcttcacatttgggaaa
gctggcgagattctcaccacaagactgcggtccatggccttcaaagcgatgctgcggcag
gacatgagctggtttgacgattacagaaacagcaccggagccctctccacgagactcgcc
acggatgctgcacaagtccaaggagccacgggaaccaggctggctttaattgcacagaac
acagccaacctcggaaccggaattatcatatcgtttatctacggttggcaattgactctt
ttgctgttatcggttgtcccattcgtcgctgtctcgggagttgtggaaatgaagatgctg
gctggaaacgccaagagagataagaaagaactggaagccgctggaaagatcgcaacagag
gccatagaaaacattcgaactgttgtatccttgacccaggaaagaaaatttgaatcaatg
tatgttgaaaaattgcatggaccttacaggaattcggtgcggaaggcgcacatctatggc
gccactttcagcatctcgcaagcgtctgtgtatttttcctacgctgcctgtttccggttt
ggcgcttacctcgttgtgaatgggcacatgcgcttcaaggatgtcattctggtgttttca
gcaattgtgtttggtgcagtggccctaggacacgccagctcatttgctccagactatgca
aaagccaagctatctgctgcacacttattcagcctgtttgaaagacagcctctgattgac
agctacagtggagaagggctgtggcctgataagtttgaaggaagtgtgacgtttaatgaa
gtcgtattcaactatcccacccgacccgacatccccgtgctccaggggctgagcctggag
gtgaagaagggccagacgctggccctggtgggcagcagcggctgcgggaagagcacagtg
gtccagctgctcgagcggttctacgaccccagggccggaacagtgcttctagatggtcag
gaagcaaagaaactgaacgtccagtggctccgagcccagctaggcattgtctcccaggag
cccatcctgtttgactgcagcatcgccgagaacatcgcctatggagacaacagccgggtc
gtgtcccaagatgagatcgagagggcggccaaggaggccaacatccaccccttcatcgag
acgctgccccaaaaatacgaaacaagagtaggagacaagggcactcagctctcaggaggc
cagaaacagaggattgctatcgctcgagccctcgtcagacagcctcgggtcctgctgctg
gatgaagccacgtcggctctggatactgagagcgaaaaggtggtccaggaagcgctggac
aaagccagggaaggccgcacctgcatcgtgatcgctcaccgcctgtccaccatccagaac
gcggacttgatcgtggtgattcagaacggcaaggtcaaggagcagggcacccaccagcag
ctactggcgcagaaaggcatctacttctcaatggtccatattcaggctggtgcacagaac
ttatga
DBGET
integrated database retrieval system
