KEGG   Arvicola amphibius (Eurasian water vole): 119804613
Entry
119804613         CDS       T08327                                 
Symbol
Kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aamp01009]
    119804613 (Kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aamp03036]
    119804613 (Kdm5c)
Enzymes [BR:aamp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     119804613 (Kdm5c)
Protein phosphatases and associated proteins [BR:aamp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119804613 (Kdm5c)
Chromosome and associated proteins [BR:aamp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119804613 (Kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD
Other DBs
NCBI-GeneID: 119804613
NCBI-ProteinID: XP_038171991
LinkDB
Position
X:22364563..22404133
AA seq 1554 aa
MELGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVV
EEGGYETICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRP
FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLMAKDKTLRKKDKEGLECPPTVVVKEELGGDVKMESASPKTFLEGKEELSH
SPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPE
IPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTEL
VEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYAKSGWNLNVMP
VLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL
AAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRA
YHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDL
NLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALA
CYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVA
LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQEAGP
DRVAGLQMTLAELRAFLGQMNNLPCAMHQIGDVKGILEQVEAYQSEAREALVSQPSSPGL
LQTLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAIMRGLLVAGASV
APSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQ
SLKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHS
WREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDL
RDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASLTSASTTASICVCGQVPAGVGAL
QCDLCQDWFHGRCVTVPRLLGSQRPSLTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILA
LLVALQRLPVRLPEGEALQCLTERAINWQGRARQVLASEEVTALLGRLAELRQRLQAESK
PEESLAYSSEAGEGAGNMPKVQGLLENGDSVTSPEKVATEEGSGKRDLELLSSLLPQLTG
PVLELPEATRAPLEELMMEGDLLEVTLDENQSIWQLLQAGQPPDLERVHTLLELEKAERH
GTRTRGRALERRRRRKVDRGGEADDPARDELEPKRVRSSEPEAEEVQEEEELEEESGGEV
PPVPFPTSGSPSTQEDQDGLEPVLEAGSDTSAPFSTLTSRLLMSCPQQPSLQQL
NT seq 4665 nt   +upstreamnt  +downstreamnt
atggagctggggtccgacgatttcctaccgccgccggagtgcccggtgttcgagcctagc
tgggccgagttccgagaccctcttggctacatcgcgaaaatcagacccatcgccgagaag
tccggcatttgcaagatccgtccacctgcggattggcagccaccctttgctgtggaagtg
gacaacttcagatttacgccccgaatccagaggttgaatgaactggaggcccagacaaga
gtgaaactgaactatttggaccagattgccaaattctgggagatccagggctcatcctta
aagattcctaatgtagaacggcggatcttggacctctatagcctcagcaaaattgtggtg
gaagaaggtggttatgaaactatctgtaaggatcgtcggtgggctcgtgtggcccagcgc
ctcaactacccacctggcaaaaacatcggttccctgctacgctctcactatgaacgcatt
gtttatccctatgaaatgtatcagtctggagccaaccttgtgcagtgtaacacacgccca
tttgataatgaggagaaagacaaggaatataaaccccacagcatcccccttcgacagtct
gtacagccttccaagttcaacagttatggacgacgggcaaagagactacagcctgatccg
gaacccacagaggaagacattgagaaaaatccagaactaaagaagctacagatatatgga
gcaggtccaaagatgatggggctgggtcttatggccaaggataagactcttcggaaaaaa
gataaggaaggacttgagtgtccccccactgtggtggtaaaggaagaattaggtggggat
gtgaagatggaatcagcctcacccaagaccttcctagaaggcaaggaggaactgagtcat
agtcctgagccctgcaccaagatgaccatgaggctgcgaaggaaccacagcaatgcccag
tttattgagtcatacgtatgccgaatgtgttcccgaggagatgaagatgacaaacttctg
ctgtgtgatggttgtgatgacaattaccacatcttttgcctgctgcctcctttgcctgag
atcccgaaaggtgtctggaggtgtccaaaatgtgtcatggcggagtgtaagcggccccct
gaagcctttggctttgagcaggctacccgggaatatactctgcagagctttggggagatg
gctgactcctttaaagctgactacttcaacatgcctgtacatatggtacccacagaactt
gtagagaaagagttctggcggctggtgaatagcattgaggaagatgtgactgttgagtat
ggggctgacatccattccaaagaatttggcagcggtttccctgtcagtgacagtaagcgg
catctaactccagaagaagaggagtatgctaagagtggttggaacctgaacgtgatgcct
gtattggagcagtctgtattgtgccacatcaatgcagatatatctggcatgaaggtacca
tggctctatgtaggcatggtcttctcagccttttgctggcatattgaggatcactggagt
tactccattaactacctccactggggtgagccaaaaacctggtatggggtcccatcactt
gcagcagaacacttagaagaagtgatgaagaagctgacacctgagctttttgatagccag
cctgatctccttcaccaacttgtcaccctcatgaatcctaacaccctcatgtcccatggt
gtgccggttgttcgaacaaaccagtgtgcaggagaatttgtcatcacttttcctcgtgct
taccacagtggtttcaaccaaggctacaactttgctgaggcagtcaacttttgcactgct
gactggctgcctgctggacgccagtgcattgagcattaccgccggctgcgaagatactgt
gtcttttctcatgaggagcttatttgcaagatggctgcctgccccgagaagctggatctg
aacctagcagcagctgtacataaagagatgttcattatggtgcaggaggagcggcgtcta
cgaaaggctctactagaaaagggtatcactgaggctgagcgagaagcttttgagctgctt
ccagatgatgaacgtcagtgcataaagtgcaagaccacatgtttcctatctgccctggct
tgctatgactgtccagatggccttgtctgcctttctcacatcaatgatctctgcaagtgc
tccagtagccggcagtaccttcggtaccgatacaccttggatgagctccctgccatgctg
cataaactgaaagttcgagctgagtcctttgacacgtgggctaacaaagtacgagtggcc
ctggaggtggaagatgggcggaagcgcagccttgaagaactgagagcactggaatctgag
gcccgtgaacgaaggtttcctaacagtgagctgctacagcgactgaagaactgcctgagt
gaggcagaggcttgtgtgtctcgggctctgggactggtcagtggccaggaagctggcccc
gacagggtggctggtctacagatgaccctggcagagctacgggcttttctgggccagatg
aacaacctgccttgtgccatgcaccagattggggatgtcaagggtattctggaacaggtg
gaagcctaccagtctgaggcccgtgaggccctggtctcacaaccctccagtccagggctg
cttcagaccctgttggagagagggcagcaactgggggtggaggtacctgaagcccagcag
ctccagcggcaagtggaacaggcgcggtggctggatgaggtaaaacgcacgctggctccc
tctgcccgaaggggtaccctggccatcatgcggggactgttggttgcgggcgccagtgta
gcccctagccctgctgtggataaggcccaggcagagcttcaggagctgctgaccatcgct
gaacgctgggaagagaaagcccacctctgcctggaggccaggcagaagcatccaccagcc
acacttgaggccataatccatgaagcagaaaacatccctgttcaccttcccaatatccaa
tctctcaaggaggctcttgctaaggctcgggcgtggattgctgatgtggatgagatccaa
aatggtgaccactacccctgcttggatgacttggagggcctagtagctgtgggtcgggac
ctccctgtggggctggaggaactgagacagctagaactgcaggtattgacagcacactcc
tggagagagaaggcctccaagaccttcctcaagaagaactcctgctacacattattggag
gtgctctgcccgtgtgcagacgccggctcagacagcaccaaacgcagccggtggatggag
aaggagctggggttgtacaaatctgacacagagctgttggggctgtctgcgcaggacctc
agggacccaggctctgtgatcgtggccttcaaagagggggagcagaaggagaaggaaggg
atcctgcagcttcgtcgcaccaactcagccaagccaagtccactggcatcattgacctca
gcctccactacagcctctatctgcgtgtgtgggcaagtgccagctggggtgggagctctg
cagtgtgacctgtgtcaggactggttccatgggcggtgtgtgacagtaccccgcctcctc
ggctcccagaggcccagtcttacctcatccccactgctggcctggtgggaatgggacacc
aaattcttgtgccctctttgtatgcgctcacggcgcccacgcttggaaaccatcctggca
ctgctggtagccctacagagactgcctgtacggctgcctgagggtgaggctctacagtgt
ctcacagagagagccatcaactggcaaggccgtgccagacaggttttggcctctgaggaa
gtgactgctctgttgggacggctggctgaactccgccaacggctacaggctgaatccaag
cctgaggaatcccttgcttactcttcagaagctggagagggcgctggcaatatgccgaag
gtccaggggctgttggagaatggggacagtgtgaccagtcctgaaaaggtagccacagag
gagggctcaggtaagagagatctggaactgctatcctcactattaccacagctgactggc
cctgtgttagaactgcctgaggcaacccgagccccgctagaggaacttatgatggagggg
gatctacttgaggtgaccctagatgagaatcaaagcatttggcagctgctgcaggctgga
cagcctccagacttggagagagtccacacacttctggagctggagaaggcagagcgccat
gggactcggacacgaggccgagccctagagaggaggcggcgaaggaaggtggatcggggt
ggggaggctgatgatccagccagagacgagctagagccaaagagggtacggagctcagaa
ccagaagccgaggaagtccaggaggaagaagaactggaggaggagtctgggggtgaggtc
cctcctgtacccttccccaccagtggcagccccagcacccaggaggaccaggatggctta
gaaccagtgttagaggctggttcagacacctcagcccctttctctactctgacttcccgg
ctgttgatgtcctgcccacagcagccatctctgcaacaattgtga

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