Arvicola amphibius (Eurasian water vole): 119804615
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Entry
119804615 CDS
T08327
Symbol
Thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119804615 (Thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
119804615 (Thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119804615 (Thoc2)
03041 Spliceosome [BR:
aamp03041
]
119804615 (Thoc2)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119804615 (Thoc2)
Spliceosome [BR:
aamp03041
]
Complex C
Other components
EJC/TREX
119804615 (Thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119804615 (Thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
119804615
NCBI-ProteinID:
XP_038171995
LinkDB
All DBs
Position
X
Genome browser
AA seq
1626 aa
AA seq
DB search
MAAATVLVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASSILNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPSGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEYK
REIVEAKQIVRKLTMVVLSTEKLDERDKEKDKDDEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITVEPLYRRVGVPKGAKGLPVSALQNKLAPKQ
VESFDDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKECQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNGHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISNWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTTEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVPKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVNKICQEEKEKRPDLYALAMGYWGLLKCRKSHMIPENEFHHKDPPPRNAVASV
QNGPGGGTSSSSLGSASKSDESGTEETDKPRERSQCGTKAVNKASSTTPKGNSSNGNSGS
NSNKAVKENDKDKVKEKEKEKKEKTPATTPEARVLGKDSKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTTIPSIESKSTQEREREKEPSRERDVSKEMKSKENVK
GGEKTPVSGSLKSPVPRSDLSEPEREQKRRKIDTHPSPSHSSTVKLVYFQVTDILPKVPL
GSENYASSPVISIHFLQDSLIDLKESSAKLYINHTPPPLSKSKEREMDKKDLDKSRERSR
EREKKDEKDRKERKRDHSNNDREVPPDITKRRKEENGTMGVSKHKSESPCESQYPNEKDK
EKNKSKSSGKEKGSSDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKKHHK
SSDKHR
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtgctggttcccgcagagtggataaagaactgggagaaatcaggg
agaggcgaatttttacatttatgccggatcctcagtgaaaacaaaagccacgacagttcg
acctacagagattttcaacaagctctctatgagttgtcatatcacgtcattaaaggaaat
ttaaagcatgaacaggcatctagcattcttaatgacattagcgaatttcgtgaggatatg
ccttctattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctgaaggaacgtttggatccagaaactttggaatcattagggctcatcaaacag
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttattaagagaagagaatgaaggttatgccaaactgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatattagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtaattttagaagtatttgaatgc
aggccagagcacgatgacttctttatatctttattagaatcttacatgagcatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaagtggt
gagacaccgtcatctttgtatagagttgcagcagtgcttctgcaatttaatctcattgat
ttagatgatctttatgtacatctccttccagctgataattgcattatggatgaatacaaa
cgagaaattgtggaagctaaacaaattgtaagaaaactcacaatggttgtattgtctact
gagaaacttgatgaacgagacaaagaaaaggacaaggatgatgagaaagtagaaaagcca
cctgacaaccagaagcttggtttgttggaagccttgttaaagatcggggattggcagcat
gcacagaacatcatggatcagatgcctccatactatgcagcttcacataaactaatagct
ctagctatttgcaagcttattcacataactgttgagcctctataccgaagagttggtgtt
cctaaaggtgctaaaggcttacctgttagtgctttgcaaaacaagttagcaccaaagcaa
gtggagagctttgacgatttgaggagggatgtattcaacatgttctgttaccttggtcct
cacctatctcatgatccaattttatttgcaaaagtcgtgcgcataggcaagtcatttatg
aaagagtgtcagtcagatggaagcaaacaagaagataaagaaaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc
aatgcttgcatgtctgaggaactatgggggatgtttaaaacatttccctatcagcataga
taccgtctgtatggccagtggaagaatgaaacttataatggtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaagtatatcatgaagcgtctaaccaaggaaaat
gtgaagccttcaggaagacaaattggcaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaaatatgataacttgataacacctgttgtagattca
ttgaaatacctcacttcattgaattatgatgttttggcctattgtattattgaagcttta
gctaatccagaaaaggagaagatgaagcatgatgacaccaccatctcaaactggcttcag
agtctggctagtttctgtggtgcagtgttccgtaaatacccgattgatcttgctggtctt
cttcagtatgtagccaatcaattaaaggcaggcaaaagttttgacctactaatattgaaa
gaagtggtacagaaaatggcaggaattgaaattacagaggaaatgacaacagagcaatta
gaggccatgactggtggggagcaactaaaggctgagggtggttattttggccagatcaga
aacactaaaaaatcttctcagagattaaaggatgcactattggaccatgatcttgctctt
ccactctgtttactaatggctcagcagaggaatggagtaatttttcaggagggtggagag
aaacacttaaaacttgtgggaaagctctatgaccagtgtcatgatactctagtacagttt
ggtgggtttttagcatctaatctgagtacagaagattacataaagcgagtgccttcaatt
gacgtgctctgtaatgagtttcatacacctcacgatgcagcgttctttctgtctaggcca
atgtatgcacaccatatttcgtcaaaatacgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagtccataaatacattacatcatgtgagatggtgatggctcctgtc
catgaagcagtggtctccttacacgttcccaaagtctgggatgatatcagccctcagttc
tatgctacattttggtcattgacaatgtatgaccttgcagttccacataccagctatgaa
agagaagtcaataaacttaaagtccagatgaaagcgattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgttgcacggcccttcaggacaaacttcttgaa
gaagaaaagaagcagatggaacatgttcagagagttcttcagagactgaaattggaaaaa
gacaactggcttttagcaaagtcaaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgcattttttcagcaatagatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgaccgagtt
ttttctgacataatttacacagttgcaagctgtactgaaaatgaagctagtcggtatggg
agatttctctgctgcatgttagagacagtgaccaggtggcatagtgatagagccacatat
gaaaaggaatgtggaaattatccaggattccttactatattacgggcaactggatttgat
ggaggaaataaagctgatcaattagattatgaaaattttcgacatgttgtacataagtgg
cattacaaattaaccaaggcatcggtgcattgccttgagacaggcgaatatactcacatc
aggaatatactgattgtgctaacaaaaatacttccttggtacccaaaagttctaaatctg
ggtcaggctttggaaagaagagtgaacaaaatatgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactgggggctgttgaaatgtagaaagtctcacatg
atacctgaaaatgaatttcatcacaaagatcctcctccaaggaatgctgttgcgagtgta
caaaatggtcctggtggtgggacttcatcatcatccctaggaagtgcgtctaaatcggat
gaaagtggtactgaggagactgataaaccaagggagagatctcaatgtggtacaaaagct
gttaataaggcttctagtaccacaccaaaagggaattcaagcaatggaaatagtggctct
aacagcaacaaagctgttaaggaaaatgacaaagacaaagtaaaggagaaagaaaaagag
aaaaaagaaaagactccagcgacaactccagaggccagggtacttggtaaagatagtaaa
gaaaaaccaaaggaagagcggccaaataaagatgaaaaagcaagagagacaaaggaaaga
acacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagcaaaagatgag
aaattcaagaccaccattcccagcatagaatcaaaatctactcaagaaagagaaagagaa
aaggagccatccagagaaagagatgtatcgaaggaaatgaagtcaaaggaaaatgttaaa
ggaggagaaaaaacacctgtttcagggtccttgaagtcacctgttcccagatcagatctc
tcggagcctgaaagggaacaaaaacgccgtaaaattgatactcatccttctccatcacac
tcctccacagtaaagctggtttatttccaggttacagacatacttcccaaagttcctctg
ggttctgagaactatgccagctcacctgtcatctccattcattttctacaggacagtctc
atcgatctcaaggaatcttcagcaaagctctacattaatcatactcctccaccactgtcc
aagagtaaggagagagaaatggacaagaaagatttggacaagtcaagggaaagatccaga
gaaagagagaaaaaagatgaaaaggacaggaaagagcggaaaagggatcactcaaacaat
gaccgtgaagtgccaccggacataacaaagaggcggaaagaggaaaatggaacaatgggg
gtttcaaaacacaaaagtgagagtccatgtgaatctcaatatccaaatgagaaagacaaa
gaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcagtagtgattcgtttaaatct
gagaagatggataaaatctcctctggtggcaaaaaggaatccagacatgataaagaaaag
atagaaaagaaagagaaacgggatagttcaggaggaaaggaagaaaagaaacatcataag
tcctctgacaagcacagataa
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