Arvicola amphibius (Eurasian water vole): 119804626
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Entry
119804626 CDS
T08327
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119804626 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119804626 (Atrx)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119804626 (Atrx)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
119804626 (Atrx)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119804626 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119804626
NCBI-ProteinID:
XP_038172028
LinkDB
All DBs
Position
X:complement(65060553..65227183)
Genome browser
AA seq
2480 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETCSSPRVVMNQSTDKNSGSVINSDMMENN
KEEGTSTSEKSKSLGSSRSKRKPSIVTKYVESDDEKPMDENVNEKAANENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTILDENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKKKIKVD
SEKSSKVCDQTSKFSPKKNSSSCNGEEKKLEDSCSGSVTCTYSALTVPKELTKKTKKLIE
TTSNMNSSYIKFLKQAADNSEMSPALKLRQLKAFKSVLADIKKTHLALEEDLNSEIRALD
AVHKEKNTKELKITDVKSETKARKGDKFSITEKKDLLKVDARSSAKVIGSEHIPGEEHKA
NKSTSGEHKGSSRKDGPQYGPSNSSEDLDMDIVSIPSSVPEDIFDSLENAMEVQCSADYQ
VHGHSGTVPEVEGSSLKLTTSSKDSRGSSKSKMAAKVRKELYVKLTPVSLSNSPIKGADL
QEVSKEKDGRKNSGVAPNSEKCGLEEENSDNEHSVQNDVALLLEESDLRRSPRVKTTPLR
RQTESNPAISNSDEESNESIKEKQKLSVPIRKKDKRNSTDCAVDNPKPHKVPKAKQPTVV
DQNSDSDEMLAVLKEVSQMGHSSSSDTDINETHMNHKAEAGTDDNGKRKRKNSTSGSDFD
IKKGKSTDTSVISKKKRQSYSESSNYDSELEREIKTMSRIGAARITKKSVSGKKEHDFSE
DEKQSKKVVDNEGQARVQTVQEGLSSDDTGDTEKQGENLSVAGGSVEKDKSAMELSEVLC
AREQPSASSYGAEKPSGGEEDGNSDDRRVSKTKERSKHVRTRACRKVLSGSSDGADRFPK
KEHSDESSESEKQQKRRETGAKGKKTSDLKEETIKSEPQYESSSDGTEKLPERKEIGHFP
KGIKPNKQDTSDGEKKGKKSKDKFSKKKEDASDSIDKLPDKGDSCDSSEEKKSKNVTSQK
EKKKSSLAAKCSGKRPECSSSDTEKYSLKGECDSTEKRPKRIEFRERRNLNSKRNTKEIQ
SASSSSDAEGSSEDNKKRKKQRTSAKKKIGSAKDKRRKSLRTSAKRKQADITSSSSDLED
DDQNSAGEESSDEQKIKPVTENLVLPSHSGFCQSSGDEALSKSVPVTVDDDDDDNDPENR
IAKKMLLEEIKANISSDEDGSSDDQPEGEKKRIGKQSEETPGDEEAPNQVNSESDSDSEE
SKKPRYRHRLLRYKLTVSDGESGEEKKTKPKEHKEAKGRNRRKVSSEDSEDTDFQESGVS
EEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSHSEEEKKEDD
DEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERERE
REKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWD
CCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALN
WMNEFEKWQEGLNDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLSQGR
NVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQN
NLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAG
CVQRKDYTALTKFLPPKHEYVLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLF
QDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDEYAKKKKT
KGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNNPSVSVKLEESKTTSTS
NPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIED
FLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRL
FIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTME
DKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLP
KDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNIP
TGTNLPPVTFSAQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLED
IISTVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNR
RLQQQYNQQQQQQMTYQQATLSHLMMPKPPSLIMTPSNYQQIDMRGMYQSVAGGMQPPPL
QRAPPPMRSKNPGPSPGKSM
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctagcacattcatcagaagaatctgaggaaacgtgttcttcgccacgagttgttatg
aaccaaagcacagataaaaacagtggttctgtaattaactctgatatgatggaaaataac
aaggaagagggaactagcacctcagaaaaatccaaatcattaggatcttcacggtcaaag
aggaaaccttcaattgtgacaaaatatgtagaatctgatgatgaaaaaccaatggatgag
aatgtaaatgaaaaagctgctaatgagaattcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatggacttcatgggatcgtgagctgcacagcttgtggacaacaggtcaatcatttt
caaaaagattccatttacagacacccttcactgaaagttcttatttgtaagaactgtttt
aagtattatatgagtgacgatattagccgtgactcagatggaatggatgagcaatgtaga
tggtgtgcagaaggtgggaacttgatttgttgcgacttttgccataatgccttctgtaag
aaatgcatcttgcgcaaccttggtcgaaaggagttatctacaatactggatgaaaacaat
caatggtattgctacatttgtcaacccgagcctctattggacttggtcactgcatgtaac
agcgtatttgagaatttagaacagttgttgcaacaaaataagaagaagataaaagttgac
agtgaaaagagtagtaaagtatgtgaccaaacatccaaattttctccaaagaagaatagt
tctagttgtaatggagaagaaaagaaattagaagattcatgttctggttctgtaacctgc
acttactcagcactcactgtgcccaaagaattgactaagaagacaaaaaaactgattgag
actacatctaacatgaactccagttatattaagtttctgaaacaggcagcagataattca
gaaatgagtcctgctctgaagttacgtcagcttaaagcttttaaatctgtgttggctgat
atcaagaagactcatcttgcattggaagaagatttaaattcagagatccgagctttggat
gctgtgcacaaagagaaaaataccaaagagcttaaaatcacagatgtaaagtctgaaaca
aaagcgcgaaagggggacaaattctctattacagagaagaaagatcttttaaaggtagat
gctagatcatcagctaaggtcataggcagcgagcacatcccaggagaagagcacaaagca
aataaaagtactagtggtgaacataagggttcaagtaggaaagatggacctcagtatgga
ccttctaattcttctgaagacttagacatggacattgtgtccattccttcctcagttcct
gaagacatattcgacagccttgagaatgctatggaagttcagtgttcagctgattatcaa
gtacatggccacagtgggactgtgccagaagtggagggctcatctctaaaacttaccact
tcttcaaaagatagcagaggaagtagtaagtcaaaaatggcagcaaaagtaagaaaggaa
ttatatgttaagctcacccctgtctccctttctaattccccaattaaaggtgctgacctt
caggaagtttcaaaagagaaggatggccgtaaaaattctggggtggcccccaactcagag
aaatgtggactggaagaggaaaatagtgataatgagcattcagttcaaaatgatgttgca
ttacttttagaagaatctgatcttcgaagatctccacgtgtaaaaactacacccttgagg
agacaaacagaaagtaaccctgcaatatcgaattcagatgaagaaagtaatgaatctatt
aaagagaaacaaaagttgtcagttccgataagaaaaaaggataagcgaaattctactgac
tgtgctgttgataaccctaaacctcataaggtgcccaaagctaagcaacccacggttgtg
gatcaaaattcagattctgatgaaatgctagcagtccttaaggaggtaagccagatggga
cacagctcttcttcagacactgacattaatgaaacacacatgaatcataaagctgaagca
gggaccgatgataatggaaaaaggaaacggaaaaattctacttctgggtcagactttgac
attaaaaaaggaaagtcaactgacacctctgttatctctaaaaagaaacgccaaagctac
tcagagtcctctaactatgactcagagttagagagagagataaaaaccatgagcagaatt
ggcgctgccagaataactaaaaaaagtgtttcaggcaaaaaagaacatgacttttctgaa
gatgaaaaacagagcaaaaaagtagtggataatgaagggcaggccagagtgcagactgta
caagaaggattgtctagtgacgacactggcgacactgaaaaacagggagagaatttgtct
gtagcgggaggctcagtagagaaagacaagagtgccatggaattgagcgaggtgctttgt
gcaagggagcagccaagtgcttcctcctatggtgcggaaaagccttcgggtggagaggag
gatggaaattctgatgacagaagagtttctaaaactaaagagaggagtaaacatgtgaga
accagagcatgtagaaaagtactgagtggttcatctgatggtgctgatagatttccaaag
aaagagcacagcgatgaatcttcggaaagcgagaagcagcagaagagacgggaaactgga
gcaaaaggaaagaaaacttcagacctaaaagaagaaacaattaagtcagagccacagtat
gagtcttcctctgatggtactgagaagttgcctgagagaaaagaaattggccattttcct
aaaggcataaagccaaataaacaggacacaagtgatggagaaaagaaaggcaaaaaatcg
aaagacaagttttccaaaaagaaggaagatgcatctgatagtattgataagttgccagac
aaaggagacagttgtgactcttcagaagagaaaaaaagcaagaatgtaacttctcagaaa
gagaagaaaaaatccagcttggctgcaaagtgttcagggaagaggccagagtgttcatcc
tcggatactgagaaatactccttgaaaggagagtgtgactccaccgagaagagacccaaa
agaattgaattcagagaaagaagaaatttaaattccaagagaaataccaaggaaatccag
agtgcttcctcttcttctgatgctgagggaagttcagaagataataaaaagcggaagaaa
caaagaacttcagccaaaaagaagataggcagtgccaaggataaaagaagaaagtcctta
agaacaagtgctaaaaggaagcaagcagacattacttcttcgtcttctgatctagaagat
gatgatcagaattctgcaggcgaagagagcagcgatgaacagaaaataaagcctgtgact
gaaaatttagtgctgccttcacacagtggattttgtcagtcttcaggagatgaagcctta
tctaaatcagtgcctgtcacagtggatgatgatgacgacgacaatgatcctgagaataga
attgccaagaagatgcttttagaagaaattaaagccaatatttcctctgatgaggatgga
tcttcagatgatcaacctgaaggagagaaaaaaagaattggaaaacaaagtgaagaaacc
ccaggagatgaggaagccccaaatcaagtcaattctgaatcagattcagattccgaagaa
tctaagaagccaagatacagacatagacttttgagatacaaactgacggtgagtgatgga
gaatctggagaagaaaaaaagacaaagcctaaagaacataaagaagccaaaggaagaaat
agaaggaaggtgagcagtgaggattcagaagacactgactttcaagagtcaggagttagt
gaagaagtcagtgaatctgaggatgaacagcggcctagaacaaggtctgcaaagaaagca
gaattggaagaaaatcagcggagttataaacagaaaaagaaaagacgacggattaaagtt
caagaggattcctccagtgaaaataagagccattctgaagaagaaaaaaaggaagatgat
gatgaggaggaggaggaagaggaggaggaggaggatgaaaatgatgattctaagtcccct
ggaaaaggcagaaagaaaattcggaagattctaaaagatgataaactaagaacagaaacc
cagaatgcccttaaagaagaagaagagagacgaaaacgtattgcagagagagaacgtgag
agagagaaattaagagaggtgatagaaattgaggatgcctcacctaccaagtgtccaata
acaaccaaattggttttagatgaagatgaagaaaccaaagaacctttagtgcaggttcat
agaaacatggttataaaattgaaaccccaccaagtagatggtgttcagtttatgtgggat
tgctgctgtgagtctgtgaaaaagacaaagaaatctccaggttcagggtgtattcttgcc
cactgcatgggccttggtaagaccttgcaggtggtcagttttcttcacacagttcttttg
tgtgacaaattggatttcagtacagctttagtagtttgtcctcttaacactgctttgaac
tggatgaatgaatttgagaagtggcaggagggactaaatgatgatgaaaagcttgaggtc
tctgaattagcaaccgtgaaacgtcctcaggagagaagttatatgctacagagatggcaa
gaagatggtggcgttatgatcataggttatgagatgtacagaaatctttctcaaggaagg
aatgtgaagagtcggaaacttaaagaaattttcaataaagctttagttgatccaggccct
gattttgttgtttgtgatgaaggccatattctaaaaaatgaagcatctgctgtttcaaaa
gctatgaactctatacgatcaagaaggaggattattttaacaggaacaccacttcaaaat
aacctaattgaatatcattgcatggttaactttatcaaggaaaatttgcttggatccatc
aaggagttcaggaatagatttataaatccaatccagaacggtcagtgtgcagattctacc
atggtagatgtgagagtgatgaaaaagcgtgctcatattctctatgagatgttagccgga
tgtgttcagaggaaagattatacagcattaacaaagtttttgcctccaaaacatgaatat
gtattagctgtgagaatgactgctattcagtgcaagctctatcagtactacttagatcac
ttaacaggtgtaggtaatagcactgaaggtggaagaggaaaggcaggtgcaaagctgttt
caagactttcagatgttaagtagaatttggactcatccttggtgtttgcaactggactac
attagcaaagaaaataagggttattttgatgaagatagtatggatgaatttatagcttca
gattctgatgaaacctccatgagcttaagctcagatgagtatgcaaagaagaagaaaaca
aagggtaaaaaagggaaaaaggatagtagctcaagtggaagtggtagtgacaatgatgtt
gaagtcatcaaagtctggaattcaagatctagaggaggtggagaaggaaatgtggatgaa
acaggaaacaacccctcagtttctgtgaagctagaggaaagtaaaactacttccacttct
aacccaagtagtccagctccagattggtacaaagattttgttacagatgctgatgctgag
gttttagagcattctggaaaaatggtacttctttttgaaattcttcgaatggcagaagaa
attggggataaagttcttgtttttagccagtcgctcatatctttggacttgattgaagat
tttctcgaattggctagtagggagaaaacagaagataaagataaacctcttatttataaa
ggtgaagggaagtggctccggaatattgactattaccgcttggatggttctactactgca
cagtcaaggaaaaagtgggccgaggaatttaatgatgaaaccaatgtgagagggcgattg
tttatcatttccaccaaagcagggtctcttggaattaacctggtagctgctaatagagtg
attatatttgatgcttcttggaatccatcttatgacatccagagtatattcagagtttat
cgctttggacaaactaagcctgtttatgtgtataggttcttagctcagggaaccatggaa
gataagatttatgatcgacaggtaacaaagcagtcactgtctttccgagttgttgatcaa
cagcaggttgaacgtcattttaccatgaatgagcttactgaactttatacttttgagcca
gacctattagatgaccccaattcagaaaagaagaagaaaagggatacccccatgctgcca
aaggataccatacttgcagagcttcttcagatacacaaagaacacattgtaggatatcat
gaacatgattctcttttggaccacaaagaagaagaagagctgactgaagaagaaagaaaa
gcagcttgggctgaatatgaagcagaaaagaagggactgaccatgcgtttcaacatacca
actgggaccaatttaccccctgtcactttcagcgctcagactccttatattccttttaat
ttgggagccctgtcagcaatgagtaatcaacagctggaggaccttattaatcaaggaaga
gaaaaagttgtagaagcaacgaacagtgtgacagcagtgaggatccagcctcttgaagat
atcatttcaactgtatggaaagaaaacatgaatctctctgaggcccaagtacaggcatta
gcattaagtagacaagccagccaggagcttgacgtgaaacgaagagaagcaatctacaat
gatgtattgacaaaacagcagatgttaatcagctgtgttcagcgaatacttatgaacaga
aggctccagcaacagtacaatcagcagcagcaacaacaaatgacttatcagcaagcaact
ctgagtcacctcatgatgccaaagcctccaagtttaatcatgactccttctaactaccag
cagattgatatgagaggaatgtatcagtcagtggctggtggtatgcagccaccaccctta
caacgtgcaccacccccaatgagaagcaaaaatccaggaccttccccagggaaatctatg
tga
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integrated database retrieval system
