Arvicola amphibius (Eurasian water vole): 119804660
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Entry
119804660 CDS
T08327
Symbol
Mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119804660 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119804660 (Mid1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119804660 (Mid1)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119804660 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Inhibitor_Mig-6
Motif
Other DBs
NCBI-GeneID:
119804660
NCBI-ProteinID:
XP_038172111
LinkDB
All DBs
Position
X:15035877..15154434
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDGNTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSHSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDVALSQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatttgtctggagctctttgaggaccct
ctcctgctgccctgcgcacatagcctctgcttcaactgcgcccaccgcatcctggtctct
cactgtgccaccaacgagcctgtggagtccatcagcgccttccagtgccccacctgccgg
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcacccttcag
aacatcattgacaggtttcagaaagcctctgtgagcgggcccaattctcccagtgagacc
cgcagggagcgggcctttgacggcaacaccatgtcttctgctgagaaggttctctgccag
ttctgtgaccaggatcctgcccaagatgctgtgaagacctgtgtcacttgtgaagtgtcc
tactgcgatgagtgcctgaaagccactcacccgaacaagaagccctttacaggccatcgt
ctgattgagccaatcccggactcacacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttggagagcaatctcaccaatctcattaagaggaacacagaactggagaccctt
ttggctaaactcatccaaacttgtcagcatgttgaagtcaatgcatcacgtcaagaagcc
aaattgacagaagaatgtgatcttctcattgaaatcattcagcaaagacgacaaattatt
ggaacaaagattaaagaaggaaaggtgatgaggctccgcaaactagctcagcagattgca
aactgtaaacaatgcattgaaaggtcggcatcactcatatcccaagcggaacactctctg
aaggagaatgaccatgcccggtttctacagacagcaaaaaatatcaccgagagagtctcc
atggcaaccgcatcatcccaggtcctaattcctgaaatcaacctcaatgacacgtttgac
acttttgccttagatttttctcgggagaagaaactgctagaatgtctggattaccttaca
gctcccaaccctcccacaattagagaagagctctgcacagcttcctatgacactatcacc
gttcactggacttcagatgatgagttcagtgtggtctcctatgaactccagtacaccata
ttcactggacaagccaatgttgttagtctgtgtaactcggctgatagctggatgattgtg
cccaacatcaagcagaaccactacactgtgcatggcctacaaagtggcaccaagtatatc
ttcatggtcaaagccatcaaccaggcaggcagccacagcagtgagcctgggaagttgaag
acgaacagtcagccatttaaactggatcccaaatctgcccatcgaaaactgaaggtatcc
catgataacctgacagtggaacgagatgagtcatcctccaaaaagagtcatacgcctgaa
cgcttcaccagccaaggaagttacggcgtggctggaaacgtgttcattgatagtggccgc
cattactgggaagtggtcataagtggaagcacatggtatgccattggccttgcatacaaa
tcagcccccaaacacgaatggattgggaagaactctgcttcctgggctctctgccgctgc
aacaataattgggtggttaggcataacagcaaggaaatccccattgagccagccccccac
ctccggcgcgtaggcatcctgctggactatgataatggttccatcgctttttatgatgct
ttgaactccatccacctctataccttcgatgtggcgctttcgcagccggtgtgccccacc
tttactgtgtggaacaagtgtttgacgattataacgggtcttcccatcccagaccatttg
gactgtacagaacagctaccttga
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