Arvicola amphibius (Eurasian water vole): 119804665
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Entry
119804665 CDS
T08327
Symbol
Abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1 isoform X1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp02010
ABC transporters
aamp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119804665 (Abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119804665 (Abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119804665 (Abcd1)
Enzymes [BR:
aamp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
119804665 (Abcd1)
Transporters [BR:
aamp02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
119804665 (Abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
Rad17
SMC_N
Adeno_IVa2
Motif
Other DBs
NCBI-GeneID:
119804665
NCBI-ProteinID:
XP_038172122
LinkDB
All DBs
Position
X:135786132..135807711
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AA seq
736 aa
AA seq
DB search
MPVLSTPRSSRVTTLKRTAVVLALTAYGVHKIYPLVRQCLTPARGPQVPAGEPTQEASGA
TAAKAGMNRVFLQRLLVLLRLLFPRVLCRETGLLALHSTALVSRTFLSVYVARLDGRLAR
CIVRKDPQAFSWQLLQWLLIALPATFINSAIRYLEGQLALSFRSRLVAHAYSLYFSQQTY
YRVSNMDGRLRNPDQSLTEDVVAFAASIAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGT
AWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHE
VELALLQNSYQDLASQINLILLERLWYVMLEQFLMKYVWSASGLLMVAVPIITATGYAES
DSEAMKKAALEMKEEELVSERTEAFTIARNLLTAAADATERIMSSYKEVTELAGYTARVY
EMFQVFEDVQHCRFKRTGDLEEAQARPGAMVRSGVRVEGPLKIQGQVVDVEQGIICENIP
IITPTGEVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYSGVLYKPPPQRMF
YIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCSEQQLEAILGIVHLRHILQREGGWEAVCD
WKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHR
PSLWKYHTHLLQFDGEGGWKFEKLDSATRLSLTEEKQRLEQQLAGIPKMQGRLQELRQIL
GEAATPVQPLVPGVPT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgctctccactccacggtcctcgagggtgaccacgctgaagcgcacagctgtg
gttctggcactcacagcctatggagtccacaaaatctaccctctagtacggcagtgtctg
actcctgccaggggccctcaggtgccagctggagagcccacgcaagaggcctctggggcc
acagcagccaaggctggcatgaaccgggtattcctgcagcggctcctggtgctcctgagg
ctgctgttcccccgagtcttatgtcgggaaacagggttgctggccctgcattctactgcc
ctggtaagccgaactttcctgtctgtgtatgtggcccggctggacggcagactggcccgc
tgcattgtacgtaaggacccacaggcctttagctggcagctgctgcagtggctcctaatc
gcccttcctgccactttcatcaacagtgccatccgctacctagagggccagctggctctg
tctttccgaagccgactagttgctcatgcctatagcctctacttctcccagcagacttac
taccgagtaagcaacatggatggacggcttcgaaaccctgaccagtctctgacagaggat
gtggtagcctttgctgcctctatagcccacctctattccaacttgaccaagccactactg
gacgtggccgtgacctcctacactctacttcgagctgcccgctccagaggagctggcaca
gcctggccctcagccattgctggcctggtggtgttcttaacagccaacgtgcttcgagcc
ttctctcccaagtttggagagctggtggcagaggaggcaaggcggaagggtgaactgcgc
tacatgcactctcgagtggtggccaactcagaggaaattgccttctatgggggccatgag
gtggagctggcactactgcagaactcctatcaagacctggcttcacagatcaacctcatc
ctgctggaacgcctatggtatgtcatgctggaacagttcctcatgaaatatgtatggagt
gcatccggcctgctaatggtagctgtccccatcattacagcaactggctatgcagagtca
gactcagaagccatgaagaaggcagccttagaaatgaaggaggaggagctggtcagtgag
cgcacagaagccttcaccattgcccgaaacctcctcacagctgctgcagatgccactgag
aggatcatgtcatcctacaaggaggtgacagagctggctggatacacagccagggtgtac
gagatgttccaggtttttgaagatgtccaacactgtcgttttaagaggactggggatcta
gaggaggctcaggctaggcctggggccatggtacggtctggtgtccgtgtagaggggccc
ctgaagattcaaggccaagtggtggatgtggagcaggggatcatctgtgagaacatccct
atcatcacacccacaggagaggtggtggtggccagcctcaacatcagggtggaagaaggc
atgcacttgctcatcacaggccccaatggctgcggcaagagctcgctgttccgaatcctg
ggtggactctggcccacatacagtggtgtactctataagcccccaccccagcgcatgttc
tatatccctcagaggccatacatgtctgtgggctccctgcgcgaccaagtgatctatccc
gattctgcggaggatatgcggaggaagggctgttcggagcagcagctggaagccatcttg
ggcatcgtacatcttcgccacatcctgcagcgggagggaggttgggaggctgtgtgtgac
tggaaggatgtcctgtctggaggtgagaaacagaggatcggcatggcccgcatgttctac
cacaggccaaagtacgccctcctggatgagtgcactagtgctgtgagcattgacgtggaa
ggcaagatcttccaagcagccaaagatgctggtatcgccctactgtccatcacccatcgg
ccctccctatggaagtaccacacacacttgctgcagtttgatggggagggaggatggaag
tttgagaagctggactctgcaacccgcctaagcctgactgaggagaagcagcgcctggag
cagcagctggcaggcatccccaagatgcaggggcgccttcaggagctccgccaaatcctt
ggcgaggctgcaaccccagttcagcccctggtcccaggtgtccccacttga
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