Arvicola amphibius (Eurasian water vole): 119804729
Help
Entry
119804729 CDS
T08327
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119804729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119804729
03036 Chromosome and associated proteins [BR:
aamp03036
]
119804729
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119804729
Coactivators
SAGA/TFTC/STAGA complex
119804729
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119804729
STAGA complex
119804729
TFTC complex
119804729
SAGA complex
119804729
SLIK complex
119804729
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
CFAP251_N
DSE1_N
Beta-prop_Aladin
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SCAP
PAC11
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Tricorn_2nd
Beta-prop_SPT8
ASA1
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_WDR19_1st
WD40_RFWD3
WDR54
Beta-prop_NWD2_C
PROPPIN
TRM82_WD
Ge1_WD40
Nbas_N
YfmQ
Motif
Other DBs
NCBI-GeneID:
119804729
NCBI-ProteinID:
XP_038172269
LinkDB
All DBs
Position
X
Genome browser
AA seq
662 aa
AA seq
DB search
MNLSHRNRVHRKSKILSRLQETPRPRRAPSRRADRELTRALGGSGRQRACSRLPPGVATP
RTPQALWLRRLEVLKGGRTEQVQVAVTCYLKRRQYMDSEGPLKQGLRLSQTPEEMAANLT
VQSESGCANAVSAAPCQAEPQQYEVQFGRLRSFLTDSDSQHSHEAMPLLYPLFVYFHLNL
VQSGPKSTVESFYSRFHGMFLQNASQKDIIEQLQTTQTIQDILSNFQLRAFLDNKYVVRL
QEDSYNYLIRYLQSDNNTALCKVLASTFTWKVQPAKRTDYHLYASGGSSRSESSSLEPPD
VPNPILQNEAALEVLQESIKRVKDGPPSFTAICFYAFYNTEQLLNTAEISSDSKLLATGF
DNSCIKLWSLQSKKLKSEPHLVDTSRIHLACDTLEEEENEEDNTGTEMKILRGHCGPVYS
TRFLADNSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRT
ARLWSFDRRYPLRIYAGHLADVDCVKFQPNSNYLATGSTDKTVRLWSAQQGNLVRLFMGH
RGPVLALSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVAS
ASMDNSVRVWDIRSTSCNTPADGSSGEFVGVYTGQMSNVLSVQFMACNLLLVTGITQENQ
EH
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgagccatcgaaatagagttcaccgcaagtcaaaaattctctcgaggctccag
gagaccccgcggccccgccgggcgccctcgcgccgagccgaccgcgagctcacgagggcg
ctcggcggaagtggccggcagagggcctgctcgcgcctgccgccgggagtcgccaccccg
cggaccccgcaggcgctctggctccggcgtcttgaggtcctgaaaggagggcgcacggag
caggttcaggtggcagtgacctgctacctcaaacgccggcagtacatggactcagaaggc
cccttgaagcaaggcctaagactatcacagactcctgaggagatggcagccaacctcaca
gtccaatcagaatctggttgtgccaatgcagtgtctgcagccccttgccaggcagaaccc
cagcaatatgaagtacagtttggacgactgagaagctttctcactgattctgactcccag
cacagtcatgaagctatgcctctcctctaccccctttttgtctacttccacctcaacctg
gtccagagtggccccaaaagcacagtggaaagcttctatagccgcttccatgggatgttc
ctacaaaatgcaagccagaaggacatcattgagcagctgcaaaccacacagaccatccag
gacattctgtcaaacttccaacttcgtgcattcctggacaataagtacgtggtccgtctc
caggaagatagctacaactaccttatccgctacctccaaagcgataacaacactgccctg
tgcaaggtgcttgcgagcacattcacgtggaaggtgcagcctgccaagaggacagactac
catctgtatgccagtggtggctcctcgcgcagtgagagcagcagcctggaaccaccagat
gtgcccaaccctattctgcagaatgaggctgccctggaagtcttgcaggaaagtatcaag
cgagtcaaggatggacctccttccttcaccgccatctgcttctatgccttctataacaca
gagcagctgctgaatactgcagagatctcctctgatagcaaacttctggctactggattt
gacaattcctgcataaagctctggagcttgcagtccaaaaagctgaaatcagagccccac
cttgtggatacatctcgtatccatctagcctgtgacactttggaggaggaggagaatgag
gaagacaatacgggcacagagatgaagatcctgcgtggacactgtggcccagtatacagc
acacggttcctcgcagacaactcggggctgctctcttgttctgaagatatgtccatcagg
tactgggacctggggagcttcaccaacactgtgctctatcagggacatgcctaccctgta
tgggacgtggacatcagcccctacagcctgtattttgccagtgggtcccatgaccgtact
gccaggctctggtcctttgatcggaggtacccactgaggatatatgcaggacacctggct
gacgtggactgtgtcaaattccaacccaactcaaactacttggctacaggttccactgac
aaaactgtccggctatggagtgcccagcagggcaacttggtgcggctcttcatggggcac
cgaggtcccgtgctcgccctttccttctctcccaatggtaagtacttggcgtctgctggt
gaggaccagcggttaaagctgtgggacttggcctctgggacactttttaaagaactgaga
ggccacacagacagtatcaccagtctggcctttagcccagacagtggtctggttgcctct
gcctccatggacaactctgtgcgtgtctgggacatcagaagcacgtcctgcaacacacct
gctgatggctcttcgggtgagtttgtgggtgtgtacactggacagatgagcaatgtcctg
agtgtacagttcatggcctgcaacctcctcctggtgactggaatcacacaagagaatcaa
gaacattaa
DBGET
integrated database retrieval system
