Arvicola amphibius (Eurasian water vole): 119804797
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Entry
119804797 CDS
T08327
Symbol
Hcfc1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03083
Polycomb repressive complex
aamp04980
Cobalamin transport and metabolism
aamp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119804797 (Hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
119804797 (Hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119804797 (Hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aamp01009
]
119804797 (Hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119804797 (Hcfc1)
03029 Mitochondrial biogenesis [BR:
aamp03029
]
119804797 (Hcfc1)
Protein phosphatases and associated proteins [BR:
aamp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119804797 (Hcfc1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
119804797 (Hcfc1)
HMT complexes
COMPASS/SET1 complex
119804797 (Hcfc1)
MLL-HCF complex
119804797 (Hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
119804797 (Hcfc1)
Mitochondrial biogenesis [BR:
aamp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
119804797 (Hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
119804797
NCBI-ProteinID:
XP_038172410
LinkDB
All DBs
Position
X:complement(135999220..136023263)
Genome browser
AA seq
2096 aa
AA seq
DB search
MASAVSPANLPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLVPQAATAPPSTTTIQVLPTVPGSSISVPTAART
QGVPTVLKVTGPQATTGTPLVTMRPASQTGKAPVTVTSLPASVRMVVPTQSAQGTVIGSN
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVNPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGAH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVTSAVGQQNGNVVRVCSNPPC
ETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTSTATTAMSSMGTGQQRDTRRASS
TPTVVRITVAPGALERAQGTVKPQCQTQQTNMTSTTMTVQATGAPCPAGPLLRPSVALEA
GSHSSAFVQLALPNVRIGLSGPSSKDMPTGHQLETYQTYTTNTPTTALSIMGTGELGAAQ
VAPTSIYESLQASSPSSTMTMTALEALLCPSATMTQVCSNPPCETHETGTTNTATTCNAG
SAQRVCSNPPCETHETGTTHTATTATSNGGAGQPEGGQQPAGGHPCETHQTTSTGTTMSV
SVGALLPDATSSRGTLESGLEVVAVPTVTSPAGATLLASFPTQRVCSNPPCETHETGTTH
TATTVTSNMSSNQDPPPAASDQGEVVNTQGDSANITSASGITTTVSSTLPRAVTTVTQST
PVPGPSVPNISSLTETTPGALTSEVPIPATITVTIANTETSDMPFSAVDILQPPEELQVS
PGPRQQLPPRQLLQSASTPLMGESAEVLSASQTPELQAAVDLSSTGDPSSGQESASSAVV
ATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAAT
EEAQALAIQAVLQAAQQAVMVGFFGPGAGTGEPMDTSEAAAAVTQAELSHLSAEAQEGQA
TTIPIVLTQQELAALVQQQQQLQEAQAQQQQHLPTEALAPADSLNDPSIESNCLSELASA
VPSTVALLPSTAADSLAPSNTFVAPQPVVVASPAKMQAAATLTEVANGIESLGVKPDLPP
PPSKAPVKKENQWFDVGVIKGTSVMVTHYFLPPDDAVQSDDDSGTVPDYNQLKKQELQPG
TAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGK
IIEYSVYLAIQSSQAGGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAI
IFRIAARNEKGYGPATQVRWLQETSKDSSGTKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctgtgtcccctgccaacttgccggcggtgcttctgcagccccgctggaag
cgagtggtgggttggtcgggtccagtgccccgaccccgccacggccaccgtgccgtggct
atcaaggagctcatagtggtgtttggcggcggcaatgaagggatagtggacgaactgcac
gtgtacaacactgcaaccaaccagtggttcatcccagctgtgagaggggatatccctcca
ggatgtgcagcctatggctttgtgtgtgatggtactcgcctactggtgtttggtggaatg
gtggagtatggaaaatacagcaacgacctctatgaactccaggctagtcgctgggaatgg
aagagactgaaagcaaagacgcccaaaaatgggcctcctccatgtcctcggcttggacac
agcttctcccttgtgggcaacaaatgctacctatttgggggtctagccaatgatagtgag
gaccccaagaacaacattccgaggtacctgaatgacttatatatactcgaactacgacca
ggctctggagtggtagcttgggacatccccatcacttatggagtcctgcctccacctcgg
gagtcacatactgctgtggtctacactgaaaaagataacaagaaatcaaagctggtgatc
tatggagggatgagtggctgcaggctaggggacctttggactctggatatcgagacactg
acatggaataaacccagccttagtggggtggcaccccttcctcgaagccttcactctgca
accaccataggaaacaaaatgtatgtgtttggtggctgggtgcctcttgtcatggacgat
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacgctggcttgtctcaac
ctggataccatggcctgggaaactatcctgatggatacactggaagacaacattcctcga
gctcgagctggtcactgtgctgttgccatcaatactcgcttgtacatttggagtggccgt
gatggctaccgcaaggcctggaacaaccaggtctgttgcaaggacctgtggtatttggag
acagaaaagccaccacccccagcccgagtacaactagtacgagccaacaccaactcactg
gaggttagctggggtgcagtagcaacagccgacagttaccttctgcagctccagaaatac
gacattcctgccacggctgctacggccacctcccccactcccaatccagtcccatctgtg
cctgccaaccctcccaagagccctgcaccagctgcagctgcacctgctgtacagccactg
acccaagtaggcatcacacttgtgccccaggctgccactgcacccccaagcactaccacc
atccaggtcttgccaacagtaccaggcagctccatttctgtgcccactgcagccaggact
caaggtgtccctactgttctcaaagtgactggtcctcaggctacaacaggaaccccactg
gttaccatgagacctgccagccagactggaaaagcccctgtcactgtgacctccctgcct
gctagtgtgcgaatggttgtgcccacacagagtgcccaggggacggtgattggcagcaac
ccacagatgagtgggatggctgcattggctgctgctgccgctgccacacagaaaatccct
ccttcctcagcacccacagtgctgagtgtcccagcaggcaccaccattgtcaagacagtg
gctgtgacacctggcacaaccactcttccagccactgtgaaggtggcctcctcccctgtc
atggtgagcaatccagccactcgtatgctaaagactgcagctgcccaagtggggacatct
gtgtcctctgctgccaacacatctacccgccctatcatcacagtacacaaatcaggcact
gtgacggtggcccagcaagcccaggtggtgaccacagtggtaggcggagtcaccaagacc
atcaccctagtgaagagccccatctctgtcccaggaggcagtgctctgatttccaatctt
ggaaaagtgatgtcagtggtccagaccaaaccagttcagacttcagcagtcacaggtcaa
gcctctacaggccctgtgactcagatcatccagaccaaagggcctctgccagcggggact
atcctgaagctggtgacatcagcagatggcaagcccacaaccatcattaccaccacgcag
gctagtggggcagggaccaagcctaccatcctgggcatcagtagtgtctctcccagcacc
accaaacctggcacgactactatcatcaagaccattcccatgtcagccattatcacccag
gcaggcgccacaggtgttaccagcagtcctggcattaagtcccctatcacaattattacc
accaaggtaatgacttctggaacaggagcacctgcaaaaatcataactgctgtccccaag
attgctactggccatggacagcaaggagtgacccaggtggtgctaaagggggcccctgga
cagccaggcaccatcctccgcactgtgcccatgggcggcgttcgcctggtcaaccctgtc
actgtctccgctgtcaagccagctgtcaccacattggttgtgaagggcaccacaggtgtc
acaactctaggcacagtgacaggcactgtctctaccagtcttgcaggagctggggcccat
agcaccagtgcctccctggccacacctattaccaccttgggcaccattgccactctttca
agccaggtcatcaaccctactgccatcacagtatcagctgcacagaccactttgacagct
gctggtgggcttaccacacccacaatcacaatgcagcctgtctcccagcctacccaggtg
actctgatcacagcacccagtggggttgaggcccagcctgtacatgaccttcctgtgtcc
attttggcctcacctactaccgagcaacccacagcaacagtcaccatcgctgactcgggc
cagggtgatgtacagcctggcactgtaacactggtgtgctccaacccaccctgtgaaacc
catgaaacaggcaccaccaacacagccactaccactgttgtggctaaccttgggggacat
ccccagcccacccaggtacaatttgtttgtgacagacaggaggcagctgcttctcttgtg
acctcagctgtgggacaacagaatggtaatgtggtccgtgtctgttcaaaccccccctgt
gagacccatgagacaggtaccaccaacactgccacaaccgccacctccaacatggctggg
cagcatggctgctcaaaccccccctgcgagactcatgagacaggcaccaccagcactgcc
actacagcaatgtccagcatgggtactgggcagcagcgagacactcgtcgtgcctctagc
acccctactgtagtgcggatcactgtggctcctggggcgttggagagagcccagggtact
gtgaagcctcagtgccaaacacagcagaccaacatgaccagcaccaccatgactgtgcag
gccaccggagctccatgcccagctggcccactgctcaggccaagtgtggcactggaggct
gggagccacagctctgcctttgtgcagctagcccttccaaatgttagaattgggctgagt
ggccccagcagcaaggacatgcccacagggcaccaactagagacatatcagacttataca
accaataccccaaccacagccctctctatcatgggtactggggagcttggtgcagctcag
gtggcacccacatctatatatgagagcctccaggcaagctctcccagcagcaccatgact
atgacagccctagaggcattgctgtgcccttcagctaccatgacccaagtctgctccaac
ccaccgtgtgaaacccatgagacgggcaccaccaacactgccactacctgcaatgcgggc
agtgcccagcgggtatgctccaacccaccttgtgagactcatgagacgggaaccacacac
acagccaccactgccacatcaaatggaggtgcaggccagcctgaaggtggacaacagcct
gccggtggccatccctgtgaaacacaccagacgacttccactggcaccactatgtcagtc
agtgtgggtgccctgcttcctgatgccacttcctctcgtggaaccctggaatctggctta
gaggtggtagcagtgcctaccgtcacctctccagctggtgccacattgctggcttctttc
ccaacacagagggtatgctccaaccctccttgcgagacccatgagacaggcaccacacac
acagccaccactgtcacctctaacatgagctcaaaccaagatcctccaccagctgccagt
gatcagggagaggtggtgaacacccaaggtgacagcgcaaacatcaccagtgccagtggc
atcacaacaactgtgtcctcaacactgccgcgagcagtgaccactgtgacacagtctaca
ccagtcccaggtccttctgtgccgaacatctcatcactgactgagactaccccaggggct
ctgacttccgaagtccccattccagccacgataacagtgaccatagccaacacagaaact
tctgacatgcccttctctgctgttgacatcctgcagcccccagaggaactccaggtctca
ccagggcctcgccagcagctgccaccacggcaactcctgcagtctgcctccacccccctg
atgggggagtccgccgaggtcctgtcagcctcccagacccctgagctccaggccgccgtg
gatctgagcagcactggggacccatcttcaggccaggagtctgccagctctgctgtcgtg
gccactgtggtggtccagccacccccacccacacagtctgaagtagaccagttatcactt
ccccaagagctgatggctgaggcccaggcgggcaccaccacccttatggtaacagggctc
accccagaggaactggctgtgactgctgctgcagaagcagctgcccaagctgcagccact
gaagaagctcaagccttggctatccaggccgtgctccaggctgcacagcaggctgtcatg
gtaggtttttttggtcctggagcaggcactggggaacccatggatacatctgaagcagca
gcagcagtgacacaagcagagctgagccatctttcagctgaggcacaagagggtcaggcc
accaccatacccattgtgctgacacagcaggagcttgcagccctggtgcagcagcagcag
cagctccaggaggctcaagcccagcagcagcaacacctccctactgaggctctggctcca
gctgacagtctcaatgatccatccatcgagagcaactgcctcagtgagctagctagtgct
gtccctagcactgtggccttgctgccctcaacagccgctgacagccttgctccatccaac
acatttgtggctccacagcctgttgttgtagccagcccagcaaagatgcaggctgccgct
accctaactgaagtggccaatggcatcgagtccctgggtgtgaaaccggacttgccaccc
ccacccagcaaagcccctgtgaaaaaggagaaccagtggtttgatgtgggggtcattaag
ggtaccagtgtaatggtaacacactatttcctgccaccagatgatgctgttcagtcagat
gatgactcgggcacagtcccagactataaccagctgaagaagcaggagctgcagccaggc
actgcctataaatttcgtgttgccggaatcaatgcttgtggccgggggccctttagtgag
atctcagcctttaagacatgtctgcctggtttcccaggggctccttgtgccattaaaatc
agcaagagcccagatggtgctcacctcacctgggaaccaccgtctgtgacctccggcaag
atcatcgagtactctgtgtacctggccatccagagctcacaggctggtggtgagcccaag
agctccaccccagcccagctagccttcatgcgagtgtactgtgggcctagcccttcctgc
ctcgtgcagtcctccagcctctccaatgcccacattgactacaccaccaagcctgccatc
atcttccgcattgctgcccgcaatgaaaagggctacggccccgctacacaagtgaggtgg
ttgcaagaaaccagtaaagacagctcgggcaccaagccggccagcaagcgacccatgtcg
tctccagaaatgaaatctgctccaaagaagtctaaggctgatggtcagtga
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integrated database retrieval system
