Arvicola amphibius (Eurasian water vole): 119804859
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Entry
119804859 CDS
T08327
Symbol
Hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04613
Neutrophil extracellular trap formation
aamp05014
Amyotrophic lateral sclerosis
aamp05034
Alcoholism
aamp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
119804859 (Hdac6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119804859 (Hdac6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119804859 (Hdac6)
09165 Substance dependence
05034 Alcoholism
119804859 (Hdac6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aamp01009
]
119804859 (Hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119804859 (Hdac6)
04131 Membrane trafficking [BR:
aamp04131
]
119804859 (Hdac6)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119804859 (Hdac6)
Enzymes [BR:
aamp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119804859 (Hdac6)
Protein phosphatases and associated proteins [BR:
aamp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119804859 (Hdac6)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119804859 (Hdac6)
Membrane trafficking [BR:
aamp04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119804859 (Hdac6)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119804859 (Hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
119804859
NCBI-ProteinID:
XP_038172555
LinkDB
All DBs
Position
X:16376318..16399063
Genome browser
AA seq
1190 aa
AA seq
DB search
MDSARKGLSSEQRDTVKGSGRDQRSRSRSEGPSAMTSTGQDSSTRQRKSRHNPQSPPQDS
SATLKRSVKKGTVSHSSPNLAEVKKKGKMKKLSQTVEEDLIVGLQGLDLDSETKVLVGTG
LVFDEQLNDFHCLWDDSFPECPERLHAIKEQLILESLLDRCVSFQARFAEKEELMLVHSL
EYIDLMETTQYMNEGELRILAGTYDSVYLHPNSYSCACLATGSVLRLVDAVLGAEIRNGM
AVIRPPGHHAQRSLMDGYCMFNHVAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFIFDQD
PSVLYFSIHRYEQGRFWPHLKASNWSTVGLGQGQGYTINVPWNQVGMRDTDYIAAFLHIL
MPVAFEFQPQLVLVAAGYDALQGDPKGEMAATPAGFAHLTHLLMGLAGGRLILSLEGGYN
LHALAKGVSASLHTLLGDPCPMLESPGAPCASAQTSISCTLEAHEPFWEFLVRSVEPQEE
DEVEEDKVEEEDEEGRWEAATLPLNTCRWPVLQDRTGLVYDEKMMSHCNLWDNHHPETPQ
RILRIMCHLEELGLAARCLILPVRPAMDAELLTCHSAEYVERVRATEKMKTRELHREGSS
FDSIYICPSTFTCAQLATGAACRLVEAVLSGEVLNGIAIVRPPGHHAERDAACGFCFFNS
VAVAARHAQVIAGRALRILIVDWDVHHGNGTQHMFEDDPSILYMSLHRYDHGTFFPMGNE
GASSQVGRAAGTGFTVNVPWNGPRMGDADYLTAWHRLVLPIAYEFNPELVLVSAGFDAAQ
GDPLGGCQVTPEGYAHLTHLLMGLANGRIILILEGGYNLASISESMAACTHSLLGDPPPP
LTSLRPPQPGALASITETIQVHRRYWRSLRMMKMEDKEECPSSKPVTKKLPKATNPVSAK
GRATPSGKGPEAGMRKTAAAASAKESLLGHTKSKTAKAMLAQGQSSEQAARGASLDQATS
KETSVGGTTMDQHASAETTKNSPNQNTVEDPVGETEPIRTPQASCADKRSIEASPVQGAT
AQQSPDQLTGSFSTLKLNSAALETYGYEESLLGEAAGGQDMNSLMLTQGFGNFNPQDVFY
AVTPLSWCPHLVAVCPIPAEGLDTAQPCKTCGTLQENWVCLTCYQVYCSRYVHAHMVRHN
EASQHPLVLSCVDLSTWCYVCQAYVHHQDLQEVKSAAHQSKFGQDMPHSH
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggattctgctcgaaaggggttgtcttctgagcagcgggacacggtgaaaggatcgggt
cgagatcagaggagccgttccaggagcgaaggcccttcagccatgacctccaccggccaa
gattcttctaccaggcagcgaaagagtaggcacaatccccagtcgccccctcaggactcc
agcgccaccttgaagcgaagtgttaagaaggggactgtatcccactccagccccaatcta
gcagaggtaaagaagaaagggaaaatgaagaagctcagccaaacggttgaagaagacctg
atcgtggggcttcaagggctggatctggactctgagacaaaagtattggttggtactgga
ttggtgtttgatgagcaactaaatgacttccactgcctttgggatgacagtttccctgaa
tgccctgagcggctccatgccatcaaagagcagctgatcctggagagcctgctggaccgc
tgtgtgtcctttcaggcccggtttgctgagaaggaggagctgatgctggttcacagcctg
gaatacattgatctgatggaaacaacccagtacatgaatgaaggagaacttcgcatacta
gcaggcacctatgattccgtctatctgcatccgaactcatactcatgtgcctgcctggcc
acaggctctgtcctcaggctggtagatgcggtcctgggggctgagattcggaatggcatg
gccgtcatcaggcctcctggacaccatgcccagcgcagtcttatggatgggtattgcatg
ttcaaccatgtggctgtggctgcccgctatgctcaaaagaagcaccgcattcagagggtt
ctgatcgtggattgggatgtgcaccatggtcaaggaacgcagttcatctttgaccaggac
cccagtgtcctttatttctccatccaccgatatgagcagggtcggttctggccccacctt
aaagcttctaactggtctacagtaggtttaggccaaggccaaggatataccatcaatgta
ccttggaaccaggtggggatgcgggacactgactacattgccgccttcctgcacatcctg
atgccagttgcctttgagtttcagcctcagttggtcctggtggctgctggatatgatgcc
ctccaaggagaccccaagggagagatggctgccactccagcaggatttgcccacctgacc
catttgctcatgggtctggcaggaggcaggttaattctgtccctggagggtggctataac
ctccatgccctggctaagggtgtcagtgcatcactccacactcttcttggagacccttgc
cccatgctggagtcccctggtgcaccttgtgcaagtgcccagacttcaatctcctgcact
ctagaagcccatgaacccttctgggagttccttgtgagatcagtcgagccccaggaggaa
gatgaagtggaggaagacaaggtagaagaggaagatgaggaggggcgctgggaggctgct
acgctgccactgaatacatgtagatggccagtgctgcaggatcgcactgggctggtctat
gatgaaaaaatgatgagtcactgcaacctgtgggacaatcatcatcctgagacacctcag
cgcatcttacggatcatgtgccacttggaggagctgggccttgcagcacgctgcctcatc
ctacctgtgcggcctgccatggatgctgagcttcttacttgccacagtgccgaatacgtg
gagcgggtccgggccacagaaaagatgaaaacccgagagctgcaccgcgaaggttccagc
tttgactccatctacatctgccccagcacctttacctgcgcacagcttgccaccggtgct
gcctgccgcctggtggaagctgtgctttcaggagaggttttgaatggcattgcaatagtg
cgccctccgggacaccatgcagagcgggatgctgcttgtggtttttgttttttcaactct
gttgctgtagctgctcgccatgcccaagtcattgctggacgtgccctgcggatcctgatc
gtagactgggatgttcatcatggtaatggaactcagcacatgtttgaggatgaccccagt
atattatacatgtccctgcaccggtatgaccatggcactttcttccccatggggaatgag
ggtgccagcagccaagtaggccgagccgcaggtacaggcttcactgtcaatgtgccctgg
aatggaccccgcatgggtgatgctgactacctgactgcctggcatcgtctggtacttccc
atcgcctatgaatttaacccggaactcgtactggtttctgctggctttgatgctgcacaa
ggggacccactgggtggctgccaagtgacacctgagggttatgcccaccttactcaccta
ctgatgggccttgccaatggccgcattatcctcatcctagagggtggatacaacttggca
tccatctctgaatctatggccgcctgcacccattccctccttggagatccaccacccccg
cttacctcactgcgacctccacagccaggagccctggcctcaatcactgagaccatccaa
gtccatcgcagatactggcgcagtttgcggatgatgaagatggaagacaaggaagaatgc
cccagttctaagcctgtcaccaagaagctgcccaaagcaaccaatcctgtgtcagctaag
ggaagggccacaccttctggaaagggtccagaagcaggcatgaggaagactgcagcagca
gcatctgcaaaagaatctctgctaggccatactaagtcaaagacagctaaggccatgctt
gctcagggccagtcctcagaacaagctgccagaggagcttcactggaccaggccacctca
aaggagacgtctgtgggaggaaccacaatggaccagcatgcctcagcagagaccacaaaa
aattcacctaaccagaacaccgtcgaggatcctgtaggagaaactgagccgatccgaact
ccccaagcctcgtgcgcagacaagcgttctatagaagcttcccctgtgcagggagccaca
gcccagcagtcccctgaccagctcactgggagtttcagcactttgaaactaaacagtgca
gctctggagacctatggatatgaggagagccttctaggagaagcagctggagggcaggac
atgaacagcttgatgctgacacaaggatttgggaactttaatccccaggatgtcttttat
gctgtgaccccactatcctggtgtccccacttggtggcagtatgccccattcctgcagaa
ggcctggatacggcccaaccatgtaagacctgtgggacactccaggagaactgggtgtgt
ctgacttgctatcaggtgtactgcagtcgctatgtccatgcccatatggtccgccacaac
gaagcctctcagcacccgctagtcctcagctgtgttgacctgtctacctggtgttatgtc
tgccaggcttatgtccatcaccaggatctccaggaagtgaagagcgctgctcaccagagc
aagtttgggcaggacatgccccactcacactaa
DBGET
integrated database retrieval system
