Arvicola amphibius (Eurasian water vole): 119805076
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Entry
119805076 CDS
T08327
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aamp04054
]
119805076
Pattern recognition receptors [BR:
aamp04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
119805076
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_1
LRR_9
LRR_EndoS
LRR_R13L1-DRL21
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
119805076
NCBI-ProteinID:
XP_038172812
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All DBs
Position
X:65497278..65520533
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AA seq
956 aa
AA seq
DB search
MPRAVKMSWGSYVLSLQLLVMLIGLSLLSLVETYGFNKCTQYEFDIRHVFCIRKKITNLT
DAISDIPRYTTHLNLTENYIQVLPPQSFTNLPALVDLRLEWNLIWKIDEGAFRGLENLTL
LNLVENKIQSVNKSFEGLSNLEILLLSHNQITHIHKRAFTPLVKLKYLSLSRNSITNLSV
VLEAVQYLHCLEYLDLTNNSIIYLDHSPKALTSLIHLSFQGNKLMELNFSALSLPSLTTL
SASQNGHGVIQNVYLETLPQLRSLNLSGTLVKLEMLSAKHLQNVRVIDFSNRELRHGHLN
VETVCHLLKNLPRLEVLVFQKNATNAEGIKHLAKCTRLLFLDLGQNSDLVHLNDSEFDAL
PSLQRLNLNKCQLSFISNRTWGSLQNLSILDLSNNKLKGFPDFAFSPLKGLKSLFLARNP
ITELNNLAFSGLFSLKELNLARCWIVTIDRHSFTQLPNLEFLDLGANNIRTLNHGTFQCL
KKLNVLILSHNRLEIIEPRAFSGLSTLHQLDLMYNSLSYFQEHVFSGLENLQVLKLGFNN
IKYETTKTFQHPPFMKLKSLKELNLEGQRNGLQVVPKNFFQGLSSLQELLLGKNPSVFLD
HYQFDPLINLTKLDISGTKGGDRSLYLNASLFKKLKRLKILRLENNNLDSLIPGLFSSLQ
SLQILSLRFNNLKVINQSHLENLTSLMFFDVYGNKLQCNCDNMWFKNWSVNTGEVHVPFL
RSYPCQQPDSQSLLIDFDDAMCNFDFGKVYFFCSFTMVLTTMVFSWFSAKMISSLWYCLY
ICRAWYLTKWHKTEKKFLYDAFVSFSATDEDWVYEELVPALEEGNQTTFKLCLHHRDFEP
GIDIFENIQNAINTSRKTLCVVSNQYLHSEWCRLEVQLATMKMFYEHKDVIILIFLEEIP
NYKLSSYHRLRKLVNRQTFITWPDSAHQQPLFWARIRNALGNETVEKENTHLIVVE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgcctagggcagtcaagatgagttggggcagctatgtactttctctccaactcctggtc
atgttaatagggctttctctgctgtctctggtagagacatatgggttcaataagtgtaca
cagtatgaatttgatattcgccatgtgttctgcattcggaagaagatcactaacttgaca
gacgccattagtgacatacctagatatactactcacctcaacctgacagagaactacatt
caagtccttcctccccagagcttcactaatctgcctgctctggtggacttgagactagag
tggaatttaatttggaagatcgatgaaggtgcgtttaggggacttgaaaatttgaccctt
ctaaatttagtggaaaataagattcaaagtgtgaataagtcttttgagggcctgtccaat
ctggagatcttgctcctgagccacaatcagattacccatattcacaaaagagcctttact
cctcttgtcaagttgaaatatttgagcctctctcgaaacagcattaccaatctttctgtt
gtccttgaagcagttcagtatcttcactgcctggagtatcttgatcttactaacaacagc
atcatctacttggaccacagccctaaggcactgacttctctgatccacctgagttttcag
gggaacaaactaatggagttaaatttctctgctttgtcattgcctagcctaaccacgcta
agtgcttcccagaatggccacggagtcattcagaatgtgtatctggaaactctgccccag
cttaggagcttgaatctgagtggaacattggtgaaactggagatgctttcagccaaacac
ctgcagaatgtaagggttatagacttcagtaaccgggaacttagacatggtcacttaaat
gtggaaactgtttgtcacctcctcaaaaacctacccaggttagaggtcctggtttttcag
aagaatgccaccaatgcagagggcattaagcatctggcgaagtgtaccaggcttttgttc
cttgacctgggccaaaacagtgacttggttcatctcaatgacagtgagtttgatgctctg
cccagtctccaaaggctgaatctgaacaagtgccagctttccttcatcagcaacaggacc
tggggttccctgcagaacttgagcattttagatctgagcaacaacaagcttaaaggtttt
ccggattttgccttttcacccttgaagggcttgaagtctctctttctcgcaagaaacccc
atcacagaactcaataacctggccttcagtgggttattttcactgaaggagctcaattta
gctaggtgctggatagtaacaattgacaggcattcctttactcagcttccaaatctagag
ttcctagatcttggagccaacaatatccggactctcaaccatggaaccttccaatgtttg
aaaaaactcaatgttttgattctctcccacaaccggctggaaattatagagccgcgtgca
ttctctggtctcagtactctgcatcagcttgacctaatgtacaatagcttgtcatatttt
caggaacacgttttctctggcctggaaaatcttcaggttttgaaactcggttttaataac
atcaaatatgaaactactaagacttttcaacatcctccatttatgaagcttaaatctttg
aaagagctcaacctagaaggacaaagaaatgggcttcaggttgttccgaagaattttttc
caagggttgagtagcttgcaggagttactcctaggaaaaaacccctccgtattcctggac
cactaccaatttgaccctctgattaatctcacaaagctggatatctcaggaacaaaaggt
ggagatcgaagtctctatttaaatgcctccttattcaaaaaactcaaaaggctaaagatc
ctgcgccttgaaaataacaacttagattcgttgattcctggcctgttctccagtttacag
agcctacagatcttatctttaagattcaacaacttgaaggtcattaatcaaagtcatctg
gagaatctgacatcattgatgttttttgatgtctatgggaacaaacttcagtgcaactgt
gacaatatgtggttcaagaactggtcagtgaacacaggggaggtccacgtccccttcctc
cggagctacccttgtcagcagccagacagccagagtttgcttatagattttgatgatgcc
atgtgtaattttgactttggaaaggtttattttttctgttccttcacgatggtcctcacc
accatggtcttctcttggttcagtgccaagatgatttcgtctctgtggtattgtttgtat
atatgtagggcttggtacctcactaaatggcacaaaacagagaagaagttcttgtacgat
gcatttgtctccttctcagccactgatgaggactgggtatatgaagagcttgttccagcc
ctagaagaaggcaaccagaccacctttaagctttgtcttcaccaccgggactttgaaccc
ggcatcgacatctttgagaacatccagaatgcaattaacacaagccgaaaaactttgtgt
gtggtcagtaaccaatacctgcatagtgaatggtgccggcttgaagtccagctggccacc
atgaagatgttctatgagcacaaggatgtcattatcttgatcttccttgaagagattcct
aactataagctgtcgagctaccaccgactaaggaaactcgtaaacagacagacatttatc
acttggccagacagtgctcaccagcagccactcttctgggctcgcattagaaatgcattg
ggcaatgagactgtggagaaagaaaatacacatctaattgttgtcgagtga
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