Arvicola amphibius (Eurasian water vole): 119805180
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Entry
119805180 CDS
T08327
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03410
Base excision repair
aamp04140
Autophagy - animal
aamp04217
Necroptosis
aamp04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119805180
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119805180
09143 Cell growth and death
04217 Necroptosis
119805180
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
119805180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119805180
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119805180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119805180
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
119805180
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119805180
MMR (mismatch excision repair)
Other MMR factors
119805180
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119805180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
119805180
NCBI-ProteinID:
XP_038172998
LinkDB
All DBs
Position
X:complement(113987134..113987983)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTSQEAHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPLSAFFLFCSEYRPQIKGEHPGL
SIGDVAKNLGEMWNNTAADDKQPYGKTAANLKEEYEQDIAAYRAKGKPDAAKKGAVKAEK
SKKKKEEEDDEEDEEDEEEEEEEEDQDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcgtatgcattctttgtg
caaacttcccaggaggcacacaagaagaagcacccggatgcttctgtcaacttctcagag
ttctccaagaagtgttcagaaaggtggaagaccatgtctgctaaagaaaaggggaaattt
gaagacatggccaaggctgacaaggctcgttatgaaagagaaatgaaaacctacatcccc
cccaaaggggagaccaaaaagaagttcaaggaccccaatgcacccaagagacctctttcg
gccttcttcttgttctgttctgagtatcgcccccaaatcaaaggagagcaccctggctta
tccattggtgatgttgcaaagaacctgggagagatgtggaacaacaccgctgcagatgac
aagcagccctacggaaagacggctgccaacctgaaggaggagtacgaacaggatatcgct
gcctacagagctaaaggaaaacccgatgcagcgaagaagggggcggtcaaggcagaaaag
agcaagaaaaagaaggaagaggaagatgatgaggaggacgaagaggatgaggaggaggag
gaagaagaggaagaccaagatgaggaagaagatgatgatgatgaataa
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