Arvicola amphibius (Eurasian water vole): 119805564
Help
Entry
119805564 CDS
T08327
Symbol
Polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03020
RNA polymerase
aamp03420
Nucleotide excision repair
aamp05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119805564 (Polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
119805564 (Polr2b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
119805564 (Polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119805564 (Polr2b)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119805564 (Polr2b)
Enzymes [BR:
aamp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119805564 (Polr2b)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119805564 (Polr2b)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119805564 (Polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
119805564
NCBI-ProteinID:
XP_038173456
LinkDB
All DBs
Position
1:complement(26053515..26097387)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgccgacgaggatatgcaatatgatgaggatgatgatgaaatcactccagat
ttgtggcaagaagcatgctggattgtgatcagttcttattttgatgaaaaaggcttggtt
agacaacagctggattcctttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgcaccaccgattgacctacaggctgaagctcagcacgccagtggagaagttgaagag
ccgccaagatatttactgaaatttgaacaaatttatctctccaaacctactcattgggaa
agagacggtgccccttcaccaatgatgccgaatgaagccagactaagaaatctcacgtac
tcggctccgctttatgttgacataacaaagacagtcattaaagaaggtgaagagcagctg
cagactcagcaccagaaaaccttcatagggaaaatcccaattatgctgcgctcgacctac
tgcctgctgaatggcttgacagaccgagacctgtgtgagctgaacgagtgtcctttggat
cctgggggctacttcattattaatggatcagaaaaggttctgatagctcaagagaaaatg
gcaacaaacacagtgtatgtgtttgccaaaaaggattccaaatacgcctatacgggagag
tgtcgatcatgtctggagaattcttcccgacccaccagtactatatgggttagcatgctg
gcacgaggaggacagggtgcgaagaagagtgctattggccagcgcatcgtggccactctg
ccatacatcaaacaggaagttcccatcataatcgtgttcagagcattgggctttgtgtct
gatagagatattttagaacatatcatttatgactttgaagatccagagatgatggaaatg
gttaaaccatctctcgacgaagcatttgtcatccaagaacagaatgttgccttaaacttc
attggttcaagaggggcaaagcctggtgttactaaggagaaaagaattaaatatgctaaa
gaagtcttacagaaagaaatgctgcctcatgtcggtgttagtgatttctgtgagaccaaa
aaagcctatttcttggggtatatggttcacaggttacttctggcagctttgggtagaaga
gaactggatgacagagatcactatggaaacaaaagattggatcttgctgggcctctgctc
gcatttttgtttagaggaatgtttaagaatttgctaaaagaagtacgaatctatgcacag
aagtttattgatcgtggaaaggactttaacttggagttggcaattaaaacacggatcata
tctgatggactaaaatactctttagccactgggaactggggggaccagaagaaagctcat
caagccagagctggagtgtcccaggtattgaaccgcctgacttttgcatctactctttct
catctgcgtcggttaaattctccgattggtagagatggcaagctagcgaagccaagacag
ttgcataataccttgtggggaatggtgtgtcctgctgagaccccagagggccatgctgtg
ggacttgtgaagaatttagccctgatggcttatatttcagttggatctcaaccttctcca
attttggaattcttagaagaatggagcatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaactaagatttttgttaatggctgctgggttggaatccataaagatcct
gaacagctcatgaacactctgaggaagttacggcgtcagatggacatcattgtatctgaa
gtttctatgattagagatattcgagaacgggagattcggatctatacagatgcaggccgt
atctgtagaccacttctgattgtggaaaaacaaaaactgcttttgaagaagagacacatt
gaccagttgaaagagagagaatataacaactacagctggcaggatctggtggccagtggg
gtggtagaatatattgataccctggaagaagaaaccgtgatgcttgcaatgactccagat
gacttacaagagaaagaagtagcttattgctccacgtacacccactgtgagattcacccg
tcaatgattctcggcgtctgtgcatctattattccttttcccgatcataaccagtctcct
agaaacacataccagtctgctatgggcaagcaggctatgggagtttatatcaccaacttc
catgttcggatggacaccttggcccatgtcctctattatccccagaaaccactcgtgact
acacgttctatggaatatctgcgctttagagagctgccagcaggaatcaactcaattgtg
gctattgcttcatacacgggctataatcaagaagactccgttatcatgaatcgttcagct
gtggatcgaggctttttcaggtctgttttctaccgatcatacaaagaacaggagtctaaa
aaaggatttgatcaagaagaagtgtttgagaagccgacccgtgaaacttgccagggtatg
aggcatgccatttacgacaagttggatgatgatggtttgatagctccaggggttcgtgta
tcaggagatgatgttatcataggcaaaacagtcaccctgcctgagaatgaggatgaactg
gagagcaccaaccgtcgttacaccaagagagactgtagcaccttcctcagaacgagcgag
acaggcattgtggaccaggttatggtaactctcaaccaggaaggatataaattttgtaaa
ataagggtacgctccgttagaattccgcagattggagacaaattcgctagccgacatggt
cagaaaggcacttgtggtattcagtatagacaagaggatatgcctttcacctgtgaaggc
atcactcctgatatcatcataaacccccatgccatcccctctcggatgaccattggtcac
ttgatcgaatgtcttcaagggaaggtctcggctaacaaaggtgaaattggtgatgccact
ccatttaatgatgctgtcaatgtgcagaagatttctaatcttttatctgattatggctac
catctcagaggaaatgaggtcctctacaatggattcactggtcgaaaaatcacatcacag
atttttattggccccacttactaccagcgtttgaagcacatggtggatgacaaaattcat
tctcgagcccggggacctattcagatccttaacagacagcccatggagggcagatctcgt
gatggtggcctgcgttttggagaaatggaacgagattgccagattgcccatggtgcagcg
cagtttttaagagaaaggttgtttgaggcatcagatccatatcaagttcatgtttgtaat
ctttgtggaataatggcaattgctaacactagaactcatacatatgaatgcaggggatgc
cgaaacaaaacccagatttctttggtgcgaatgccctatgcgtgcaaactgttattccag
gagcttatgtccatgagtatcgcgccgcgaatgatgagcgtctag
DBGET
integrated database retrieval system
