Arvicola amphibius (Eurasian water vole): 119805810
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Entry
119805810 CDS
T08327
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
119805810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119805810
04121 Ubiquitin system [BR:
aamp04121
]
119805810
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119805810
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119805810
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119805810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
TEN_NHL
SGL
zf-B_box
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
DUF5711
COG5_N
Motif
Other DBs
NCBI-GeneID:
119805810
NCBI-ProteinID:
XP_038173543
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLFSSSSASSLSSSQTSKWSAGGGGSGAAARCLHAFC
RPCLQAHRLPAPGGAGPSEALKLRCPVCDHKVILAEAAGMDALPLSVFLLSNLLDAMVAT
ADEPLLKNGRAGGGPGGAGGHSNHRHHAHHPPQRTATPPPQPPLSLATSPAALLLRRPHC
CSSCDEGNAASSRCLDCQEHLCDNCVRAHPRVRLTKDHFNERGPPGPAATSAAQQLGLGP
PFARAPFSILSVFPERLGFCQHHHEEVPHLYCETCSVPICRECPLDRHGGHSFAYLQDAL
QDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQAEVKAVTAHHNKALKER
ECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDSTVSAVQQVLEEGRALAILLARDQML
AQLQELKAIRSLLQPQEDDRVMFTPPDQALYLALKSFGFVSSGAFAPLTKATGDGIKQAL
QGKVASFTVVGYDCDGEPCFSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYRPQLEG
EHLVSVTLCNQHIENSPFRVVVKSGPSYVGIGLPGLSFGSEGDSEGKLCRPWGVSVDKEG
YIIVADRSNNRIQVFKPCGSFHHKFGTLGSQPGQFYRPAGVACDAARRIVVADKDNHRIQ
IFTFEGQFLLKFGEKGTKNGQFNYPWDIAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYG
FERALWKYFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSAGFFGSEGSNNGQFLRPQ
GVAVDQEGRIIVADSRNHRVQMFEANGNFLCKFGDQGSGFGQMDHPSGIAVTPDGLIVVV
DVGNNRILIF
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgcccgcgccgctcttctccagctcgtctgcctcgtcgctgtcgtcgtcgcagacgtcc
aagtggtccgcaggcggcggcggctccggggcggcggcgcggtgcctgcacgccttctgc
cggccgtgcctccaggcgcaccggctgcccgcccccggcggcgcaggccccagcgaggcg
ctgaagctgcgctgtcccgtgtgcgaccacaaagtgatcctagccgaggcggcgggcatg
gacgcgctgccgttgtccgttttcctgctcagcaacctgctggatgctatggtggccacc
gccgacgagccgctgctcaagaacgggcgagcaggcggcggccccgggggcgcgggcggt
cacagcaaccaccggcaccacgcgcaccacccgccccagcgcactgccactccgccgcct
cagccgcctcttagcctggccacctcccccgcggcgctgctgctgcgtcgaccgcactgc
tgcagctcctgcgacgagggcaacgccgcctcgtcgcgctgcctcgactgccaggaacac
ctgtgcgacaactgtgtccgcgcgcacccgcgcgtgcgcctcaccaaggaccatttcaac
gagcgcggcccgccggggccagcggccacctccgcggcgcagcagctcgggctcgggccg
cccttcgcgcgcgcacccttctccatcctttcggtgttcccggagcggctcggcttctgc
cagcaccaccatgaagaggttccgcatctgtactgcgaaacctgctctgttcccatctgc
agagagtgcccgctggaccgccacgggggtcacagcttcgcctacctccaggatgccctc
caggactcgcgggcactcaccatccagttgctggctgatgcccagcagggccgccaagct
atccagctgagcattgagcaggcccagacggtggctgagcaggtggagatgaaggcgaag
gtggtccaggcagaggtcaaggctgtgacagcccaccataataaggccctgaaagagcgc
gagtgcgagctgttatggaaggtggagaagataaggcaggtgaaggctaaatctctatac
ctgcaggtggagaagcttcgtcaaaacctcaataagctggatagcaccgtcagtgccgtc
cagcaggtcctggaagagggcagagccctggctatcctgctggcccgagaccagatgctt
gcccagctgcaggagctcaaggccatccggagcctcctgcagccccaagaagatgatcga
gttatgttcacaccccccgaccaggccttgtaccttgctctcaagtcttttggctttgtc
agcagtggggcctttgccccactcacgaaggccacaggagatggcattaagcaagccctt
cagggcaaagtagcctccttcactgtggtgggctatgactgtgatggtgagccttgcttc
tcgggaggtgacctgatgtcagctgtggtcctgggccccgatggcaacctgtttggtgca
gaagtgagtgatcagcagaatgggacttacgtggtgagctacaggccccagctggagggg
gagcacctggtgtcggtgaccctgtgcaaccagcatatagagaacagccccttcagggta
gtggtcaagtctggccccagctacgtgggcatcgggctccccgggctgagcttcggcagc
gagggcgacagtgagggcaagctctgcaggccctggggcgtgagtgtggataaggagggc
tacatcatcgtggccgaccgcagcaataaccgcattcaggtgttcaagccctgcggctcc
ttccaccacaagtttggtaccctaggttcccagcctgggcagttttaccggccagctgga
gtggcctgtgatgctgcccgcaggatcgtagtggccgacaaagacaatcaccgcatccag
atctttacctttgagggccagttcctcctcaagtttggtgagaaaggaaccaagaatggg
cagtttaactacccgtgggatatagcagtgaattctgagggtaagatcctggtctcagac
accaggaaccaccgcatccagctgtttgggcctgatggggtcttcctgaataagtatggc
ttcgagagggctctctggaagtactttgactctccacggggtgtggctttcaaccacgag
ggtcacttggtcgtcactgatttcaacaaccaccggcttctggtcattcaccctgattgc
caatcggcaggcttcttcggctcagagggcagcaacaatggacagttcctccgaccacag
ggtgtagccgtggaccaggaaggtcgaatcattgtggccgattccagaaatcaccgggtg
cagatgtttgaggccaatggcaacttcctgtgcaagttcggtgatcaaggcagtggcttt
gggcagatggaccacccctcaggtatcgcggtcaccccggatggattgatcgtcgtggtg
gacgttggcaacaatcgaatcctcatcttctaa
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integrated database retrieval system
