Arvicola amphibius (Eurasian water vole): 119806301
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Entry
119806301 CDS
T08327
Symbol
Ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119806301 (Ccdc174)
03041 Spliceosome [BR:
aamp03041
]
119806301 (Ccdc174)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119806301 (Ccdc174)
Spliceosome [BR:
aamp03041
]
Complex C
Other components
EJC/TREX
119806301 (Ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
119806301
NCBI-ProteinID:
XP_038173855
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All DBs
Position
2:complement(56180210..56200998)
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AA seq
459 aa
AA seq
DB search
MDRKKKPLDVTASSLVDLKAELFRKQEEFKQEKLLKDSGVFGKPKTTNKKPSIWTKQNAG
VSSRAEKDAEQKLEEQKTLDKAREKLEEKAKLYEKMTKGDFPDEEMEDMYLVDFTQKIID
KRKEMEVLGATRESGNAEERDDDEEFSEKDIPPPQDPSEEWVDYVDSLGRSRRCMRKDLP
DLLEMDKNLQGRLFVSPANEKTLLSEDMRKELQRQQWEEEEREALKKPMGPIHYEDIREN
EARQLGVGYFAFAKDKELRNKQMKTLEMLREQTTDQRIKRENIKEKRKAMLEARLAKLRQ
KKIKKSKEDGTEEENRGGDVTVLLPSEPKAVPAPPPVAPNSKVEVIIQERKDTKPGVPHI
REWDRGKEFSFGYWSKKQSELRAERDPEFAPPSNYFVGQKRTGALSSQPWSKPAPAPSDS
GHGSGSSHTSASASESPPQASTVTFQTLDDMISYYKQVT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaaagaaaaaacctttggacgttacagcctcctcgttggtagatcttaaggct
gagctcttccgaaaacaagaagaattcaaacaagaaaaacttctaaaagattctggagtc
tttggaaaaccaaagacaactaataagaagccaagtatctggaccaagcagaatgctggt
gtttccagtcgagcagagaaggatgcagaacagaagcttgaagagcagaagactttagac
aaagcaagggaaaaattggaagaaaaggccaaattatatgaaaagatgactaaaggagac
tttccagatgaggaaatggaggacatgtaccttgtggatttcacacagaagatcatagac
aagcgaaaggaaatggaggtgcttggtgctactagagagtctggaaatgcagaagagaga
gatgatgatgaagagttttctgaaaaagacatacctcctccccaagaccccagcgaggag
tgggtggattacgtggactctttgggtcgatcccgacgctgcatgagaaaggatttacca
gatctattggagatggataaaaatcttcagggaagacttttcgttagtcctgctaatgaa
aaaactttattatctgaagacatgaggaaagaacttcagcgccagcaatgggaagaagaa
gaaagggaggctctgaaaaagccaatggggcctatccattatgaagacattagggaaaat
gaggcccgacaacttggtgttgggtattttgcctttgccaaagacaaagaattgagaaac
aagcaaatgaaaactttagagatgcttcgtgaacagacaacagatcagagaataaaacga
gaaaacataaaggaaaagcgaaaggctatgttagaagcaagacttgccaaacttcgacaa
aaaaagattaaaaaatcaaaggaagatgggactgaagaagaaaatagaggtggagatgtt
actgtgcttttgccatcagaaccaaaggctgtacctgctccacctccggtggccccgaac
agcaaggtcgaagtcatcatccaggagcggaaggacaccaagcctggcgtgccacacatc
cgagagtgggaccgaggaaaagaattttcttttgggtactggtcgaagaagcagtcagaa
ctccgggctgaacgagatcctgagtttgccccaccatcgaattactttgtgggtcaaaag
agaactggtgctttgagtagccagccgtggagcaagccggcaccggcaccaagcgactcg
gggcacggctctggctcgtcacacacatctgcttctgcctctgaaagcccaccacaggcg
tccacagtcactttccagaccctagatgatatgatatcttactataaacaagtcacatga
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