Arvicola amphibius (Eurasian water vole): 119806349
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Entry
119806349 CDS
T08327
Symbol
Tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119806349 (Tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119806349 (Tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamp03016
]
119806349 (Tnpo3)
Transfer RNA biogenesis [BR:
aamp03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
119806349 (Tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
119806349
NCBI-ProteinID:
XP_038173941
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All DBs
Position
2:complement(176632476..176711408)
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AA seq
923 aa
AA seq
DB search
MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESC
YFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMP
SWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTV
VSLLMTCVEKAGTDEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSN
LHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV
IHSIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFRMRVSDLVKDLIFLIGSMECF
AQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLVEVLEGVVRLPETVHMAVRYT
SIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDHMAQHFNG
LLEIAHSLDSFMLSPEAAVGLLKGTALVLARLPLEKITECLSELCSVQVMALKKLLSQEP
SNGISSDPTVFLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYRVHQHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWA
IASTTLDHRDANCSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMNQLGQQLVSQLLHT
CCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHK
QVTSAEECKQVCWALRDFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagccaagccaacattgcagctcgtgtaccaggcagtgcaggcgctttaccac
gacccagatcccagcggaaaggagcgcgcctcgttttggcttggggagctgcaacgttcg
gttcatgcctgggagatttctgatcaattgttacagatccgacaggatgtggaatcatgc
tattttgctgcccagaccatgaaaatgaaaattcagacttcgttttatgagctacccaca
gactctcatgcttctttaagggactcattgctaactcatattcagaacttgaaagatttg
tcacctgtcattgtaacacagctggctttagcaatagcagaccttgccctacagatgcct
tcttggaagggatgcgtacaaacattggtagaaaaatatagcaatgatgtaacttctttg
ccctttttgctggagatccttacagtgttacctgaagaggtacacagtcgttccttgcga
attggagccaataggcgcacagaaattatagaagacttggccttctattctagtacagtg
gtatctttattgatgacatgtgtagaaaaagcaggaactgatgagaagatgcttatgaag
gttttccgctgtttgggaagctggtttaacttgggagttttggacagtaacttcatggct
aataataagttattagcgctgctttttgaggttttgcagcaggataaaacctcatctaac
ctccatgaagctgcttcagactgtgtatgctcagctctctatgctattgaaaatgtggag
actaacttgccattggccatgcagctttttcagggggtcctgacattggagactgcttat
catatggctgtggcacgagaagatttagacaaagttctgaattactgccgtatcttcact
gaactatgtgaaactttcctggaaaaaattgtttgtactccaggccaaggtctgggagat
cttcgaactttggaactgcttcttatttgtgcaggccaccctcagtatgaggtagtagaa
atttcctttaacttttggtaccgactaggagagcatttgtataaaaccaatgatgaagtc
atccacagcatattcaaagcatacattcagaggctgctccacgccttggctcggcactgc
cagttggaaccagaccatgagggagttcctgaagagactgatgactttggggagtttcga
atgagagtgtcagacctggtgaaagacctgattttcttgattggatctatggaatgtttt
gcccagttgtactctactctgaaagaaggcaacccaccctgggaggtgacagaagcggtt
ctctttatcatggctgctatagcaaagagtgttgatccggagaacaatcctacacttgtg
gaggtactggagggagttgtccgtctcccagagactgtccacatggctgtgcgctacacc
agcatcgagctggttggtgaaatgagtgaagtggttgaccggaaccctcagttcctcgac
cctgtattgggctatttgatgaaaggcctgtgtgaaaagcctctggcttctgctgcagcc
aaagccattcataacatttgctcagtttgtcgggatcatatggctcagcactttaatgga
ctcctagaaattgcccactcccttgattctttcatgttgtctcccgaagctgctgtgggt
ttgctaaaaggaacagctcttgtcctagcaagactccctttggaaaagattactgaatgt
cttagtgagctatgttctgttcaggttatggcattgaaaaagctgttgtctcaggagccc
agcaatggcatatcttcagatcccactgtgttcttagatcgcctggcagtaatatttagg
cacaccaatcctattgtagaaaatggacagacgcatccgtgccagaaagtcatacaggaa
atatggccagttttgtctgagactctaaataaacaccgagctgacaatcggattgtagaa
cgttgttgcagatgcctgcgcttcgctgttcgttgtgtaggcaaagggtctgcagccctt
ctacagccactagtcacacagatggtgaatgtgtaccgtgtacatcagcattcctgtttc
ctgtaccttggcagtatccttgtggacgagtacggcatggaagaaggctgtcggcaggga
ttattagacatgctccaggcactatgcattcccacttttcagctcctagaacagcagaat
ggcctccaaaatcaccccgacactgtagatgacctattcaggttagccacccgatttatt
cagcgtagccctgtcaccttactgagaagccaagtagtcatccccatcttacagtgggcc
attgcgtctaccaccttggaccaccgagatgccaactgcagtgtcatgaggtttctacga
gacctcatccacacaggagtagcaaatgatcatgaagaggattttgaattgcgtaaggaa
ctgattggacaggtgatgaaccagcttggacagcagcttgtaagccagctgctccacaca
tgctgcttctgtctgcccccttacaccttaccagatgttgctgaggtgctctgggagatc
atgcaggttgacagaccgaccttctgtcggtggctagagaattccttgaaaggtttgcca
aaggagacaactgtgggagctgtcacggtgacacataaacaacttacagatttccacaag
caagtcactagtgccgaggaatgtaagcaagtttgctgggccttgcgagacttcaccagg
ttgtttcggtag
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