KEGG   Arvicola amphibius (Eurasian water vole): 119806357
Entry
119806357         CDS       T08327                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013  Nucleocytoplasmic transport
aamp03015  mRNA surveillance pathway
aamp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119806357
  09122 Translation
   03013 Nucleocytoplasmic transport
    119806357
   03015 mRNA surveillance pathway
    119806357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aamp03019]
    119806357
   03041 Spliceosome [BR:aamp03041]
    119806357
Messenger RNA biogenesis [BR:aamp03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     119806357
Spliceosome [BR:aamp03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    119806357
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 119806357
NCBI-ProteinID: XP_041910409
LinkDB
Position
1:190794077..190914947
AA seq 179 aa
MSVGSDKAAASLFQPCRGSCLRTLSGGLLKALLSDSYVELSEYRDQHFWGDNEEQEKLLK
KSCTLYVGNLSVYTTGEQIYELFSKSADIKKIIMGLDKMKKTACGFCFVEYYSRADAENA
MRYINGTRLDDRIIRTDWDAGFKEGRQYGSGRSGGQVRDEYRGDYDAGRGGYGKLAQKQ
NT seq 540 nt   +upstreamnt  +downstreamnt
atgagtgtgggcagtgataaagcagcagcctcgctcttccagccgtgtcgtggttcctgt
ctccgcaccttgtccggtggcctcctgaaggcgctgctcagcgactcttatgtggagctc
agcgagtaccgggaccagcacttctggggtgacaatgaagaacaagaaaaattactgaag
aaaagctgtacgctatatgttggaaatctctccgtttatacaactggagagcagatttat
gagctcttcagcaagagtgctgatataaagaagatcatcatgggtctggacaagatgaag
aaaacggcctgtggcttctgttttgtggagtactactcgagagcagatgcggagaacgct
atgcggtacataaacggaacccgtctggatgaccggatcatacgcacagactgggacgca
ggctttaaggagggcaggcagtacggaagtggtcggtctgggggtcaggttcgagatgag
tatcggggtgactacgatgctgggagaggcggctatggcaagctggcacaaaaacagtga

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