Arvicola amphibius (Eurasian water vole): 119806480
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Entry
119806480 CDS
T08327
Symbol
Shank2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
119806480 (Shank2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
PI3K_rbd
SAM_4
SAM_CEP-1_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119806480
NCBI-ProteinID:
XP_038174135
LinkDB
All DBs
Position
1:145772762..146206593
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AA seq
1831 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDYSMGSESDSSKEETIYDTIRATTEKPSGPKMEEIQDNTLVIR
VLIQDLQQTKCIRFNPDATVWVAKQRILCTLNQGLKDVLNYGLFQPASNGRDGKFLDEER
LLREYPQPTGQGVPSLEFRYKKRVYKQSNLDEKQLARLHTKTNLKKFMDHTQHRSVEKLV
KLLDRGLDPNFHDLETGETPLTLAAQLNDSMEVIKVLRNGGAHLDFRARDGMTALHKAAR
MRNQVALKTLLELGASPDYKDSYGLTPLYHTAIVGGDPYCCELLLHEHASVCCKDENGWH
EIHQACRYGHVQHLEHLLFYGADMSAQNASGNTALHICALYNQDSCARVLLFRGGNKELK
NYNSQTPFQVAIIAGNFELAEYIKNHKETDIVPFREAPAYSNRRRRPPNTLAAPRVLLRS
NSDNNLHAGAPEWAVCSAATSHRSLSPQLLQQTPSKPDGATKSLGSYVPGPRSRSPSLNR
LGGTGEDGKRPQPHWHVGSPFTPGANKDSLSTFEYPGPRRKLYSAVPGRLFVAIKPYQPQ
VDGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPRDSQAETRADRSK
KLFRHYTVGSYDSFDAASDCIIEDKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFP
ALQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKVVTVT
RNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTAELEELDKPEEIVPASKPSRTAENVAI
ESRVATIKQRPTSRCFPAASDVNSVYERQGIAVMTPTVPGSPKGPFLGLPRGTMRRQKSI
GITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPPPSPTTYNCPKSPTPRVY
GTIKPAFNQNPVAKVPPATRSDTVATMMREKGMFYRRELDRFSLDSEDVYSRSPAPQAAF
RTKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCSIPIPTIIVK
EPSTSSSGKSSQGSSMEIDPQATEPGQLRPDDSLTVSGPFAAAIAGAVRDREKRLEARRN
SPAFLSTDLGDEDVGLGPPAPRILPSNFPEEGGFGDEDGTEQPLSPTPGTAPRELENHFL
GGGEAGTPGETGGPLSSTSKAKGPESVLAAPLKSGSPASPENYVHPLTGRLLDPSSPLAL
ALSARDRAMQESQQGHKGEAPKADLNKPLYIDTKMRPSVESGFPPVTRQNTRGPLRRQET
ENKYETDLSKDRRGDDKKNMLINIVDTAQQKSAGLLMVHTVDVPTAGPPLEEEEDREDVD
IKPDHSPSTVPEGVPKTEGALQISAAPEPTAAPGRTIVAAGSVEEAVILPFRIPPPPLAS
VDLDEDFLFTEPLPPPLEFANSFDIPDDRAASVPALADLVKQKKNDTPQPPSLNSRQPAN
STDSKKPTGISNCLPSSFLPPPESFDAVTDSGIEEVDSRSSSDHHLETTSTISTVSSIST
LSSEGGESMDTCTVYADGQAFVVDKPPVPPKPKMKPIVHKSNALYQDTLPEEDTDGFVIP
PPAPPPPPGSAQASMAKVIQPRTSKLWGDVTEVKSPILSGPKANVISELNSILQQMNRGK
SIKPGEGLELPVGAKSANLAPRSPEIMSTVSGTRSTTVTFTVRPGTSQPITLQSRPPDYE
SRTSGPRRAPSPVVSPTELNKEILPTPLSAAAASPSPTLSDVFSLPSQSPAGDLFGLNPA
GRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKETFMDNEIDGSHLP
NLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcagccccacatccagtgaggacgagatggcccagagcttctccgactattcc
atgggctcagagtcagatagttccaaagaagagaccatctatgacacgatccgggccacc
acagagaaaccaagcggcccgaagatggaggagatccaggacaacaccttggtgattaga
gtactcatccaggatctgcagcagacgaagtgcattcgatttaacccagatgccaccgtg
tgggtggccaagcagcgaatcttgtgtaccctgaaccaaggcctgaaggatgtactcaac
tatgggctcttccagccagccagcaatgggcgggatggcaagttcctggatgaggaacgg
ctgctgcgggaatacccacagcccacgggccagggtgtgccttccctggagtttcgctat
aagaagcgtgtgtacaagcagtccaacctggatgagaagcagctggccaggctccacaca
aagaccaatctgaagaagtttatggaccacactcagcatcgctcagtggagaagctggtc
aagctgctggacagaggcctggatcccaatttccatgacctggagactggagagacgccc
ctgaccctggctgcccagctcaatgactccatggaggtcatcaaagttctcagaaatggg
ggtgcacatttggacttccgtgccagggatgggatgactgcccttcacaaggctgcccgg
atgaggaaccaggttgccctgaagaccctcctggagctcggcgcctccccagactacaag
gacagctatggactcacaccgttgtatcacacggccattgtggggggtgacccttactgc
tgcgagctccttctccatgagcatgcctccgtgtgctgcaaggacgagaatggctggcat
gagatccaccaggcctgcaggtacggccatgtccagcatctggaacatctgctcttctat
ggcgcggatatgagtgcacagaacgcctcggggaacacggccctgcatatctgtgctctc
tacaatcaggacagctgtgccagagtgctgctgtttcggggtggaaacaaggaattgaaa
aactacaacagccagacgccatttcaggtggcaataatagcggggaactttgaacttgca
gagtacatcaagaaccacaaggaaacagacatcgtgcccttccgagaggccccagcttat
tccaaccgcaggcggcggccccccaatacattggctgcccccagagttcttctacgttcc
aatagtgacaacaacctccatgctggtgcaccggaatgggctgtctgttctgcagccacc
tcccaccgaagcctctcaccccagctactgcagcagacacccagcaagcccgatggagcc
acgaagagccttggaagctatgtcccagggccccgcagtcgctccccctcactcaacagg
ctcggtggcactggcgaggatggcaagaggccacagccacattggcatgtggggtcgccc
ttcactcctggtgccaacaaggactccctctccacctttgagtacccagggcccaggagg
aagctgtatagtgcggtgcccgggagactcttcgtcgccatcaagccataccaaccccaa
gtcgacggcgagatcccccttcatcgaggtgacagagtcaaagttctgagcatcggcgag
ggcggcttctgggaaggcagcgcccgtggccatatcgggtggttcccggctgagtgtgtg
gaggaggtgcagtgcaaaccgcgggacagccaggcagaaacccgtgctgaccgcagcaag
aaactcttccggcattacacagtgggctcttatgacagcttcgatgctgccagtgactgc
attattgaggacaagacggtggtcctgcagaagaaagacaacgagggctttggatttgtg
ctccgaggggcaaaagctgatacccccattgaggagttcacaccgacaccggcattccca
gccctgcagtacctggagtccgtggatgaaggtggggttgcgtggcaagccggactaagg
accggggacttcttgattgaggttaacaatgaaaatgtcgtcaaggtgggccaccggcag
gtggtgaacatgatccgccagggagggaatcacctagtccttaaggtcgtcacagtgacc
aggaatctagaccctgatgatactgccagaaagaaagctcccccacctccaaagcgggct
ccgactacggcccttacactgcgttccaagtccatgacagcagagctggaggaactcgat
aaacccgaagagatagtgccagcctccaagccctccaggactgcagagaatgtggccata
gaatcgagggtggcaaccatcaagcagcggcccactagccggtgcttcccagcagcctct
gatgtgaattccgtgtatgagcgccaagggattgctgtaatgacgcccacggtccctggg
agcccgaaaggcccatttctgggcctccctcgaggtacgatgcgaaggcagaaatcgata
gggataacagaggaagagcggcagtttctggctcccccgatgctgaagttcacccgaagc
ttgtccatgccggacacttctgaggacataccccctccgccgcagtctgtgcccccatct
ccccctccaccttcccccaccacgtacaactgccccaagtccccgactccaagagtttat
gggacaattaagcctgcattcaatcagaaccccgtcgccaaggtgccgccagcgaccagg
tctgatactgtggccaccatgatgcgggaaaaggggatgttctaccggagagagctggac
cgattctccctggactctgaagatgtctacagccgcagccctgccccacaggccgccttc
cgcaccaagcggggacagatgcctgagaacccatactcagaggtggggaagatagccagc
aaggccgtctacgtccctgccaagccagccaggaggaagggcatgctggtgaagcagtcc
aacgtggaggacagccctgagaagacctgctccatccccatcccaaccatcatcgtcaag
gaaccctccaccagcagcagtggcaagagcagccaaggcagcagcatggagatcgacccc
caggccaccgagcctggccagctgaggccggatgacagcctcactgtcagcggtcccttc
gctgccgccatcgctggggctgtgcgtgaccgggagaagcgtctggaagccaggaggaat
tccccagccttcctctccacagacctgggagatgaggatgtgggcctggggccacctgct
ccccggatactgccctccaacttccctgaggagggtgggtttggtgacgaggatggaacg
gaacagccgctatcgcctacccctgggacagcacccagggagctggagaaccacttccta
ggtggtggtgaggctggtactccgggggagaccgggggacccctgagttccacatccaaa
gccaaggggcctgagagtgtcctagcagctcctctcaagagtggcagcccagccagccct
gagaattatgtgcacccactcacagggcggctgctcgaccccagctccccactggccctg
gcactctctgccagggatcgagccatgcaggagtctcagcaggggcacaagggggaggct
cccaaggctgacctcaacaagcctctctacatcgataccaaaatgcggcccagtgtggag
tccggctttcctccggtcaccaggcagaacaccaggggtcccctgcgacggcaagagaca
gagaacaagtacgagacagacctgagcaaggaccggaggggtgacgataagaagaacatg
ctgatcaacatcgtggatacggcccagcagaagtcagccggcctgctgatggtgcacacg
gtggacgtccccacggcagggccacccctggaggaagaggaggacagagaggatgtggat
ataaagccagaccactcaccctccacagtgccagaaggcgttcccaaaaccgaaggtgct
ttacagatctccgctgccccggagcccaccgctgcgcccggcaggaccattgtggcagcg
ggctccgtggaagaggcagtgattctgccattccgcatcccccctccccctctggcgtcc
gtggacttggatgaggactttcttttcacagaaccgttgcctcctcccctggaatttgca
aatagttttgatattcctgatgaccgggcagcttcagttcccgctcttgctgacttggtc
aagcagaagaaaaatgacacccctcagcccccttcgttgaactccaggcagccagccaac
tctacagacagtaagaagccaacgggcatttcaaactgtctgccctcctcattcctgcca
ccccccgaaagctttgacgccgtcaccgactccgggattgaggaggtggacagccggagt
agcagcgaccaccatctcgagacaaccagcaccatctccacagtgtccagtatctccacg
ctgtcctcagagggcggggagagcatggatacctgtacagtctatgcagacgggcaagcc
tttgtggttgacaaacccccagtacctccaaagccaaaaatgaagcccattgtgcacaaa
agcaacgcactttaccaagacacgctcccggaagaggacacagatggcttcgtgatcccc
ccacccgcacccccgcccccaccgggcagtgcccaggccagtatggcaaaagtcatccag
ccaaggacctccaagttgtggggtgatgtcacagaggtcaaaagcccaattctctcaggc
ccaaaggcaaatgtcattagtgagctaaactccattctgcagcagatgaacagggggaaa
tcgatcaagcccggggaagggctggaactgcccgtgggagccaagtcagccaacctcgct
ccaagaagcccggagatcatgagcacagtctcaggaacacggagcactacggtcaccttc
actgtccgccccggcacctcccagcccatcaccctgcagagccggccccccgactatgaa
agcaggacctcaggaccacggcgtgccccgagccccgtggtctcaccaacagaattgaac
aaagagattctgcccacccctctgtctgctgccgcagcctctccctcccccacactctca
gatgtctttagccttccaagccagtcccctgcaggggacctctttggcttgaacccagca
ggacgcagcaggtcaccatctccttcaatactgcaacagccaatctcaaataagcctttt
acaactaagcctgtccacctgtggacgaaaccagacgtggcagactggctggaaagtctg
aacttgggtgaacacaaggagaccttcatggacaatgagattgatggcagccacctgcca
aacctccagaaggaagacttgatagatctgggggtgactcgagttgggcataggatgaac
atagaaagggctttgaaacagctgctggacagataa
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integrated database retrieval system