Arvicola amphibius (Eurasian water vole): 119806486
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Entry
119806486 CDS
T08327
Symbol
Clec1a
Name
(RefSeq) C-type lectin domain family 1 member A isoform X1
KO
K10069
C-type lectin domain family 1 member A
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aamp04054
]
119806486 (Clec1a)
04091 Lectins [BR:
aamp04091
]
119806486 (Clec1a)
Pattern recognition receptors [BR:
aamp04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
119806486 (Clec1a)
Lectins [BR:
aamp04091
]
C-Type lectins
NK cell receptors
119806486 (Clec1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Ly49
KLRAQ
UL45
Motif
Other DBs
NCBI-GeneID:
119806486
NCBI-ProteinID:
XP_038174141
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All DBs
Position
2:19358117..19386451
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AA seq
269 aa
AA seq
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MQAKYSSTRDMLDDDDTTISLYSGASTVTRRADPRHSENETPSSVWRPVALTLLTLCLVL
LVGLAALGLVFFQFYQLSNIQQDSIAEKDERLGNVSRQLQSLQMQNRRLIETLQHVAVKL
CRELYNKSGGHRCSPCPEKWKWHGDKCYQFYKESKNWQGCEYFCLAENATMLKISTQEEL
DFAMPQSYSEFFYSYWTGLSRNGSGKAWLWTDGTPYSFELFEIIIDPNNPRNRDCMTIFN
GKAFSKDCKELRRCACERMAGRVVPEVFQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaatacagcagcacgagggatatgctcgatgatgatgacaccaccataagc
ctgtattctggagcttccactgtcaccagacgtgcagatcccaggcattcagagaatgag
actccctcttcagtttggcgcccagtggccctgactctgctgaccttgtgtttggtgcta
ctcgttggcctggcagccctgggccttgtgttttttcagttctaccagctctccaatatc
cagcaagacagcatcgctgaaaaggatgaaaggctggggaatgtatcccgacagctgcag
tccctccagatgcagaacaggagactcatagaaactctacagcatgtagctgtaaaactg
tgtcgtgaactttacaacaaaagtggaggacacagatgcagcccttgcccagagaaatgg
aagtggcatggggacaaatgttaccagttctataaagagagtaaaaactggcagggctgt
gaatatttctgcctggctgaaaatgccaccatgctgaagataagcacacaggaagagctg
gattttgccatgcctcagagctactctgagtttttctactcttattggacagggctctcc
cgcaatggcagtggcaaagcgtggctgtggacagatgggacaccttactcctttgaactg
tttgagattataatagatcccaacaacccaaggaacagggactgtatgaccatcttcaat
ggaaaggctttctcaaaggactgcaaagagctgaggaggtgtgcctgtgaacggatggca
gggagagtggtacctgaggtgttccagtag
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