Arvicola amphibius (Eurasian water vole): 119806677
Help
Entry
119806677 CDS
T08327
Symbol
Nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04621
NOD-like receptor signaling pathway
aamp05132
Salmonella infection
aamp05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119806677 (Nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119806677 (Nod1)
05133 Pertussis
119806677 (Nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aamp04054
]
119806677 (Nod1)
Pattern recognition receptors [BR:
aamp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119806677 (Nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
AAA_22
Sigma54_CBD
RsgA_GTPase
ABC_tran
AAA_25
Motif
Other DBs
NCBI-GeneID:
119806677
NCBI-ProteinID:
XP_038174477
LinkDB
All DBs
Position
2:137257039..137309126
Genome browser
AA seq
953 aa
AA seq
DB search
MEKQGHYEMEAVPPGCHSHIKLLKINREHLVTNIRNTQCLVDNLLKNGYFSAEDAEIVCA
CPTQPDKVRKILDLVQSKGEEVSEFFLYVLQQLEDAYVDLRLWLSEIGFSPSQLIRSKII
INTDPVSRYTQQLRHQLGRDSKFMMCYAQKEDLLLEETYMDTLMELVDFNNQNLGSLGGL
DCLLDHSTGILNEHGETVFVFGDAGVGKSMLLQRLQSLWASGRLTSAAKFFFHFRCRMFS
CFKESDTLCLQDLLFKHFCYPEQDPEEVFSFLLRFPHTALFTFDGLDELHSDFDLSRVPD
SCCPWEPAHPLVLLANLLSGRLLKGAGKLLTARTGVEVPRQLLRKKVLLRGFSPGHLRAY
ARRMFPERTAHEHLLQQLDANPNLCSLCGVPLFCWIIFRCFQHFHTAFEGSSQLPDCAVT
LTDVFLLVTEVHLNRTQPSSLMQRNTRSPAETLRAGWRTLHALGQVAHRGTDRSLFVFGQ
EEVQASKLQEGDLQLGFLRALPDVGPEQGQQSYEFFHLTLQAFFTAFFLVADDKVGTREL
LRFFREWTSPGETLSTSCYPSFFSFRCLGGGSRLGPDPFRNKDHFQFTNLFLCGLLAKAR
QKLLRQLVPKAILRRKRKVLWAHLFASLRSYLKSLPRVQSGGFNQVHAMPTFLWMLRCIY
ETQSQKVGRLAARGISADYLRLAFCNACSADCSALSFVLHHFQRQLALDLDNNNLNDYGV
QELQPCFSRLTVLRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQIL
DQCRGLTHLKLGKNRITSEGGKCVALAVKNSTSIIDVGMWGNQIGDEGAKAFAEALRDHP
SLTNLSLASNDISPEGGKSLAQALKHNTTLTIFWLTQNELNDEAAECFAEMLKVNQTLKH
LWLIQNHITATGTAQLAEALKKNTTITEICLNGNLIKPEEAKVFENEKRIICF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcagggccattatgagatggaagccgtcccaccgggttgccactcccacatt
aagctgctgaagatcaacagggaacatctggtcaccaacatccgcaacactcagtgtctg
gtggacaacttgctgaagaatggctacttctcagcggaagatgcagagatcgtgtgtgcc
tgtcccacccagcccgacaaggtccgaaaaattcttgacctggtgcagagcaagggcgag
gaggtgtctgagttcttcctctacgtgctacagcaactcgaggacgcttatgtggacctc
aggctgtggctatcagagatcggcttctccccttcccagctcattcggagcaaaattatc
atcaatactgacccagtgagcaggtacacccagcagctgcgacaccaactgggccgcgac
tccaagttcatgatgtgctacgcccaaaaggaggacctgcttctcgaggagacttacatg
gacaccctcatggagctagtagacttcaacaaccaaaacctaggcagcctgggaggcctg
gactgcctgctggatcacagcaccggtatcctcaacgagcatggcgagactgtcttcgtg
tttggggacgcgggagtgggcaagtccatgctgctgcagcggctgcagagcctctgggcg
tctggcaggctgacctcggcagccaagttcttcttccatttccgctgccgcatgttcagc
tgcttcaaggagagcgacacgttgtgtctgcaggacctgctcttcaagcacttctgctac
ccagagcaggaccccgaggaggtgttctccttcctgctgcgctttccccacacagcgctc
tttacttttgatggcctggatgagctgcattcggacttcgacctgagccgtgtgccggac
agctgctgcccctgggagccagcgcacccgctggtcctactggccaacctcctaagcggg
aggctgctcaagggtgccggcaagctgctcactgcccgcacaggcgtcgaggttccccgc
cagctcctgcgcaaaaaggtgctgctccggggtttctcccccggccacctgcgcgcctac
gcccgcaggatgttccccgagcgcacagctcatgagcatctgctgcagcaactggacgcc
aaccccaacctctgtagtctgtgcggcgtgccgctcttctgctggatcatcttccgctgc
ttccagcatttccacacggcctttgagggttcctcgcagctgccggactgcgccgtgacc
ctgaccgatgtcttcctgctggtcactgaggtgcatctgaacaggacacagcccagcagc
ctgatgcaacgcaacacgcgcagcccggcggagaccctgcgtgcaggctggcgcacgctg
cacgcgctcggccaggtggcacaccgaggcaccgacaggagcctgtttgtcttcggtcag
gaggaggtgcaggcatcaaagctgcaggagggggatctgcagctgggcttcctgcgggct
ctgccagatgtgggccctgagcagggccagcagtcctatgagtttttccatctcacgctc
caggccttcttcactgccttcttcctagtggcagatgacaaagtgggcacccgggagttg
ttgaggttctttcgagagtggacgtctcccggggagacactaagcacgtcctgctatcct
tccttcttctccttcaggtgcctgggtggcggcagccggttgggccctgatcctttcagg
aacaaagaccacttccagttcaccaacctctttctgtgcgggctgctggccaaggccaga
cagaaactccttcggcagctggtgcccaaggctatcctgaggaggaagcgcaaagtcctg
tgggctcacctgtttgccagcctgcgctcctacctgaagagtctgccccgggtccagagt
ggaggctttaatcaggtgcacgccatgcccacattcctgtggatgctgcgctgcatctat
gagacacagagccagaaggtggggcgcctagccgccaggggtatcagtgcggactatctc
aggttggccttctgcaatgcttgctctgctgactgcagcgccctgtccttcgtcctgcac
cacttccaaaggcagctggccctcgatctggacaacaacaacctcaatgactatggcgtg
caggagctgcagccttgcttcagccgccttacggtgctcagactcagcgtcaaccagatc
actgacacaggcgtgaaggtgttgtgtgaggaactgaccaagtacaagatcgtgacgttc
ctgggtttatacaacaaccagatcactgatatcggagccaggtatgtggcccaaatcctg
gaccaatgcagaggcctcacgcaccttaaactgggaaaaaacagaataacaagtgagggt
gggaagtgtgtggctctggctgtgaagaacagcacctctataattgatgttgggatgtgg
ggcaatcagattggggatgaaggggcaaaggccttcgcagaggcattgagggaccacccc
agcctgaccaacctcagtcttgcatccaatgacatctcccctgaaggagggaagagcctt
gcacaggccctgaagcacaacaccactctgacaatattctggctgacccaaaatgaactc
aatgatgaggcagcagagtgcttcgctgagatgctgaaagtcaaccagacactgaagcac
ttatggcttatccaaaatcacatcacagccacggggacagcccagctggctgaggcactg
aagaagaacaccaccataacagagatttgtctcaacggaaacttaattaagcccgaggag
gccaaagtctttgaaaatgagaagaggatcatctgtttctga
DBGET
integrated database retrieval system
