Arvicola amphibius (Eurasian water vole): 119806746
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Entry
119806746 CDS
T08327
Symbol
Smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119806746 (Smc6)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
119806746 (Smc6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
TPR_MLP1_2
AAA_29
DUF3993
AAA_21
Motif
Other DBs
NCBI-GeneID:
119806746
NCBI-ProteinID:
XP_038174631
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All DBs
Position
2:92804866..92908893
Genome browser
AA seq
1097 aa
AA seq
DB search
MAKRKEENFCSPENAKRPRQEELEDFDKDGDEDECTISFTNGTSTLTAAEVGIIESIQLR
NFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLKGFVKAGQ
NSADISITLRNRGDDAFRANVYGDSIVVQQHISVDGSRSYKLKSEKGTVVSTKKEELIAI
LDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTK
EQINQGEERLTELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAIR
DNIKIGEERAAKLDRKMEEQQVRLNDAEKKYKDIQDKLEKISEETNARAPECMALKTDVI
ARTRAFNDAEVLYNRSLNEYKALKKDDEQLCKRIEELKKSTDQSLEPERLERQRRICWLK
EKVQALQDQESSVNQEAAQFEQVIEKDKQEHVRIKREDIDVRHTLNYNQRQLKELKDSKT
DRLKRFGPHVPALLEAIDDAYRRRQFTHKPIGPLGACIHLRDPELALAIESCLKGLLQAY
CCHNHADERVLQSLMKKFYPPGTSRPQIIVSEFRNEVYDVRLRAAYHPEFPTVLTALEID
NAVVANSLIDMRSIETVLLIKNNSVARAVMQSQKPPKNCREAFTADGDQVFAGRYYSSEN
TRPKFLSRDVDSEISDLETEIENKKAHIINLQHHLSALEKDIKRNEELLKRCQLHYKEIK
MKIRKNISEIRELENIEEHQSVDIATLEDEAEENKIKMQMVEKNMEQQKENMENLKSLKI
EAENKYDTIKLKINQLSELADPLKDELNLADSEVDSQKRGKQHYEDKQKEHLDTLNKKRR
ELDMKEKELQEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMKQ
YQEARETYLDLDNKVRTLRRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAY
CGKMNFDHKNETLSISVQPGEGNKASFNDMRALSGGERSFSTVCFILSLWSIAESPFRCL
DEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQ
TTLPFQPVTQEEDDNTS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaaggaagaaaatttctgctctcctgaaaatgctaaaaggccaaggcaa
gaggaactggaagactttgataaagatggcgatgaggacgaatgcacaatttctttcact
aatgggacctctactttgactgcagcagaagttggaataattgagagtattcagctaaga
aacttcatgtgccattcaatgcttggaccttttaaatttggttctaatgtcaacttcgtt
gttggcaataatggaagtggaaagagtgctgtgctcaccgctctcatagttggtcttggt
ggaaaagcagttgctactaatagaggatcctctttaaaaggttttgtaaaagctggacag
aactcagcagacatctcaataacgttaaggaacagaggtgatgatgccttcagggcaaat
gtgtatggagactccatagttgtgcagcaacacattagtgtggacggaagtcgatcttac
aaactaaaaagtgaaaaaggcaccgtggtttctactaagaaggaagagctcattgcaatt
cttgatcattttaatatccaggtggacaatccagtttctgttttaacgcaggagatgagc
aagcagttcttacagtctaaaaatgagggagacaaatacaaattcttcatgaaagcaacc
cagcttgaacagatgaaggaggattattcatatattatggaaacaaaagaaagaacaaag
gagcagataaatcagggagaagagcgacttactgaactgaagcgccagtgtttggagaaa
gaggaacgttttcaaaatattgctggcttaagtacaatgaagactaacttagagtatttg
aaacatgaaatggcttgggcagtggtcaatgaaattgaaaaacaattaaatgctattcga
gataatatcaaaattggtgaagagcgtgctgccaaacttgataggaaaatggaagaacag
caggtcagacttaatgatgcagaaaaaaagtacaaagatattcaagataaactagaaaaa
attagtgaagagacaaatgcccgagctccggaatgcatggcgttgaaaacagacgtcatc
gcgaggacgagagcctttaacgatgccgaggttttgtataaccgttccctaaatgaatat
aaagcattaaagaaagatgatgaacagctttgtaaaagaatcgaggagctaaagaaaagc
actgatcagtctttggaaccagagcgcttggaaaggcaacgaagaatctgttggttgaaa
gaaaaagtacaggccttgcaggaccaggaaagttctgtcaatcaggaggctgcacaattc
gaacaagtcatagaaaaggacaaacaagaacatgtccggattaagagagaagatatagat
gtgaggcatacactgaactataatcagagacaattgaaagaactgaaagatagtaaaact
gatcgactgaaaagatttggtcctcatgttccagctctgctggaggcaatagacgacgcg
tacaggcggagacaattcactcataagcctatcggccctttaggtgcttgcattcatctg
cgggatccagaacttgctttggccattgaatcttgcttgaaaggacttctgcaagcctat
tgttgccataatcatgctgatgagagagtacttcaatcattgatgaaaaaattttatccg
ccagggacctctcggcctcagataattgtttctgaatttcggaatgaggtatatgatgtg
agactcagagctgcttaccatccggagtttccaactgttctgacagcgttagaaatagac
aatgctgttgttgcaaatagcctgattgacatgcggagcatagagacagtgctgcttatc
aaaaataattctgtagctcgtgcagtcatgcagtcccaaaagccacctaaaaattgtaga
gaagcttttactgctgatggtgatcaagtgtttgcaggtcgttattattcatctgaaaac
acaaggcccaagtttctaagcagagatgtggattctgaaataagtgatttggagactgag
attgaaaataaaaaggcccacataataaatcttcagcaccatttgtctgcccttgagaag
gatattaaaagaaatgaagaacttcttaaaaggtgccagctacattataaagaaataaag
atgaaaataagaaaaaatatttctgaaattcgggaacttgagaatatagaagaacaccag
tctgtcgatattgcaactttggaagatgaagctgaggaaaataaaataaaaatgcagatg
gttgagaaaaatatggagcaacaaaaagaaaacatggagaatcttaaaagtctaaaaatt
gaagcagaaaacaagtacgatacaattaaactaaagatcaaccagctgtcagagctggcg
gatccactgaaggatgaattaaatcttgctgactctgaagtggatagtcaaaaacgagga
aagcagcattatgaagataaacagaaagaacatttggataccttaaataaaaagagaaga
gaactggacatgaaggaaaaggagttacaggagaaaatgtcacaagcaagacagatatgc
ccagaacggatagaagtaaagaaatctgcatcaattctagacaaagaaattaatcggtta
agacaaaaaatacaggcagaacatgctagtcatggagatcgagaagaaataatgaagcag
taccaggaagcaagagaaacatatcttgatctggataataaagtaagaactttaagaagg
ttcattaaattactagaagaaataatgactcataggtacaaaacataccaacagtttaga
aggtgtttgacattgcgatgcaaattatactttgacaatttattatctcagcgggcttat
tgtggaaaaatgaatttcgaccacaaaaatgaaactcttagcatatcagttcagcctgga
gagggaaataaagcttccttcaatgacatgcgtgctttgtccggcggtgagcgctctttc
tccacagtgtgcttcatcctttccctgtggtccattgccgaatcacctttcagatgcctg
gatgagtttgatgtctacatggatatggttaacaggagaattgcgatggatatgatacta
aagatggcagattcccagcgttttagacagtttatcctgcttactcctcaaagcatgagc
tcacttccttcaagtaaactgattagaattcttcgaatgtctgatcctgaaagagggcag
accacattgcctttccaacctgtgactcaagaggaagatgacaacaccagttga
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