Arvicola amphibius (Eurasian water vole): 119806771
Help
Entry
119806771 CDS
T08327
Symbol
Herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119806771 (Herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119806771 (Herc3)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119806771 (Herc3)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
HECT type E3
119806771 (Herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
RCC1
HECT
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
119806771
NCBI-ProteinID:
XP_038174686
LinkDB
All DBs
Position
2:complement(86647047..86749295)
Genome browser
AA seq
1051 aa
AA seq
DB search
MLCWGYWSLGQPGISSNLRGGIVAEPQVCRFVSDRNIKEVACGGNHSVFLLEDGEVYTCG
VNTKGQLGHEREGNKPEQIGALADQHIIHVACGEAHSLALSDRGQLFSWGAGSDGQLGLM
TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQT
SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL
RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI
ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF
KYRIVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQAHYTNLINDETIALWRQKLSEHNN
ANTINGVVQILSSAACWNGSFLEKKIDEHFKTSPQIPGIDLNSTRVLFEKLMHSQHAMIL
EQILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYFITLTIPLAMAILRLDTN
PSKVLDNWWSQACPKYFLKLVNLYKSAVLYLLRGRKTFLIPVVFNNYMTAALKLLKKLYK
VNLKVKHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKARSSIMQDTVTLCAYPFIFDA
QAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNHLVGDALREL
SIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQESHLLWFSD
TCFVERNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPSEGRSLQ
ELLDYPGEDVEETFCLNFTVCRESYGVIQQKKLIPGGDRVAVCKDNRQEFVDAYVNYVFQ
ISVHEWYTAFSSGFLKVCGGKVLELFQPAELRAMVVGNSNYNWEELEETAIYKGDYSGTH
PTVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTATGEEYLPVAHTCY
NLLDLPKYSSKEIMKARLTQALDNYEGFSLA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgctatgttgggggtattggtctctgggccaaccaggcatcagttccaacctgcgagga
ggaatcgtggctgagccccaggtgtgccgctttgtgtcagatagaaacatcaaggaagtg
gcctgcggaggaaaccactccgtgttcctgctggaggatggagaggtttacacgtgtggt
gtgaacaccaaggggcagcttggccatgagagggaaggcaacaaaccagaacaaattgga
gcattggccgatcagcacatcatacatgtggcatgtggagaggcgcacagtctggctctt
agtgaccggggccagctgttctcctggggtgcaggaagtgatgggcaactgggactcatg
actactgaggattccgtggctgtgcccaggttaatacagaagctgaaccagcagaccata
ttacaagtttcctgtggcaactggcactgcttggctctggcagctgatggccagttcttc
acctggggaaggaacagccatggacagctgggcctggggaaggagttcccctctcaaacc
agcccacagagggtgaggtctttggaagggatcccactggctcaggtggctgcaggaggg
gcccatagctttgccctgtctctgtcaggagctgtttttggctggggaatgaacaacgca
gggcagcttgggctcagtgatgaaaaagatcgagagtctccgtgccatgtgaagctttta
cgaacacagaaagtcgtctatattagttgtggagaggagcacacagcagttctcacgaag
agtggcggcgtgtttaccttcggggctggttcctgtggacagcttggacatgactccatg
aacgatgaagttaacccacgaagagtgctggagttgatgggcagtgaagtaactcagatt
gcttgtggcagacagcacaccctagcctttgtgccttcttctggactcatctatgctttt
ggctgtggagcgagaggtcagctagggactggacacacatgtaatgtcaagtgcccctct
ccagtgaaggggtattgggctgcccacagtggtcagctttcggctagagctgatcgcttt
aagtaccgtatcgttaagcagatcttctctggaggggaccagacatttgtactttgctcc
acatatgagaattcttctcctgctgttgacttcaggactgtgaaccaagcacattatacc
aacttgataaatgacgaaaccatagcactttggagacagaaactctcagaacacaacaac
gcaaatacgatcaacggcgtcgttcagatactgtcttcggcggcttgttggaatggaagt
tttctggaaaaaaaaattgatgagcattttaagaccagcccccaaatccccgggattgac
ctgaactccactcgggttttatttgagaagctaatgcactctcagcacgccatgattctg
gaacagatactaaacagctttgaaagttgcctcatcccccagttgtcaagttcacccccg
gatgtcgaagcgatgagaatctatttaatactaccagagtttcccctgcttcaggattct
aagtatttcataacgctgactattcctctggcgatggcaattcttcggctggatacaaat
cctagcaaagtattagataactggtggtctcaggcatgcccaaaatacttcttgaagctg
gtgaacctctataaaagtgcagtcctttatctgctgaggggaaggaagacattcctaatc
ccggtggtattcaacaattacatgactgcagctctcaagctgctgaagaagttatacaag
gtaaatcttaaagtgaagcatgtggagtacgacacattctacatccccgagatctccagt
ctggtggacattcaggaagactacctcatgtggtttttacatcaagcagggatgaaggct
agatcatctatcatgcaggatactgtaaccctttgtgcctaccctttcatctttgatgcc
caagccaagaccaaaatgttgcagaccgatgcggagttacagatgcaggtggcagtcaac
ggagccaacctgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagc
cccttcctggtccttcatgtccgcaggaaccaccttgttggagatgctctgagagagctg
agcatccattccgacattgatctgaagaaacctctcaaagtgatcttcgatggggaagaa
gcagtagatgctggtggtgttacaaaggagttctttcttttgctgttaaaagaacttttg
aatcccatttatgggatgtttacctactatcaagagtcacatctcttgtggttttcagat
acatgttttgtagagcgcaactggtttcacttgattggcataacctgtggtctggcgatc
tacaactccactgtggtggatctccacttcccattggctctctacaagaagttgctgaac
gtaaagcctgggttggaagatttaaaggagctgtcaccaagtgaaggaaggagtcttcag
gagcttctagattacccgggtgaagatgttgaggagactttctgcctcaacttcacggtg
tgccgagaaagctatggggtgattcaacagaagaagctgatacctgggggagaccgagtg
gccgtgtgtaaggacaacaggcaagaattcgtggatgcttacgtgaattacgtctttcaa
atctcagttcatgagtggtacacagccttttccagtggcttcctaaaggtgtgtgggggc
aaagtcctggagctcttccagcctgcggaactgagggccatggtggtgggaaacagcaac
tacaactgggaagaactggaagagacggccatctacaagggtgattattcaggcacgcat
cccaccgtgaaactcttttgggaaaccttccatgagttcccgttagagaagaagaagaag
tttctcttgttcctgacaggcagcgaccggattcccatctatggcatggccagcctgcag
attgtcatccagtccacagccactggggaggagtacctacctgtggcccacacctgctac
aaccttcttgacctccctaaatatagcagcaaagagattatgaaggctcgactgacccag
gccctcgacaattatgagggttttagtttggcctga
DBGET
integrated database retrieval system
