Arvicola amphibius (Eurasian water vole): 119806858
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Entry
119806858 CDS
T08327
Symbol
Smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
119806858 (Smarcad1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119806858 (Smarcad1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119806858 (Smarcad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
Pox_D5
HHH_3
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
119806858
NCBI-ProteinID:
XP_038174841
LinkDB
All DBs
Position
2:complement(81524401..81598568)
Genome browser
AA seq
1022 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEAPQSSQPAPSSPISLSAEEENAEGEVSRANTPDSDITE
KTEDSSVPEPPDNESKASLSCFQSQRGIQYIDLSSDSEDVAPNCSSTVQEKKFNKDTVII
VSEPSEDEESHDLPSVTQRNDIAELEDFSELEDLKDAKLQTLKELFPQRNDNDLLKLIES
TSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEAYEEDELNDDQSLKKPRVERGEESNESA
EASSSWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDTQCASQ
SEVTNGKEVAKNQNYSKNTTKTKMKQKIAMKSQNGFNKKRKKNVFNPKKAVEDTEYDSGS
DAGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIAELTLIPQCSQKKAQRVIELRPFNSW
EALFIKMSKINGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWN
IEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGN
KGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTY
NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNL
LELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVK
EEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRKMANH
PLLHRQYYTPEKLREMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHILCKQYRHINNYQ
LDMDLILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKT
QISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCH
RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTIDEADEGSMPADIATLLKTSM
GL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgttttcgttttgagaaaaggaataagattgaggaagct
cccgaagcccctcagtcctcccagcccgctccttcatcaccaatttctcttagtgctgaa
gaggagaatgctgaaggggaagttagcagggcaaacaccccagactcagatataactgaa
aaaacagaagattctagtgttccagaacctccagacaatgaaagtaaagcaagtttatca
tgtttccaaagtcaaagaggaatacagtatattgatttgtcttctgatagtgaagatgtt
gctccaaattgttccagtacagttcaagagaaaaaattcaacaaagacacagtgattata
gtttcagagccatctgaagatgaagagtcccatgaccttccttctgtgacacaaagaaat
gacattgcagaactggaagacttttcagaattggaagatcttaaagatgctaagcttcag
acactgaaagaacttttcccacaaagaaatgacaatgatctcctaaagttgattgaatca
acaagcactatggatggagccattgctgctgccttgctgatgtttggtgatgcaggtggt
ggacccagaaaaagaaaattatcttcttcttctgaggcatatgaggaggatgaattgaat
gacgatcagtctctaaagaagccacgagtggaacgtggagaagaatcaaatgagtctgca
gaagccagcagcagctgggagaagcaggaaagtattgtattgaaattgcaaaaggaattt
ccaaattttgataaacaggaactaagagaagtgctcaaggaacatgagtggatgtacaca
gaagccttggagtctctcaaagtgtttgcagaagatcaagatacacagtgtgcttcacaa
agtgaggttacaaatggaaaagaagttgcaaagaatcaaaattattctaaaaacacaact
aaaactaaaatgaaacagaaaattgctatgaaatcacaaaatggttttaacaagaaacgt
aagaaaaatgtatttaatcctaagaaagctgtagaagataccgagtacgattcaggttct
gatgccgggagttcactggacgaggactatagcagtggtgaagaagtgatggaggatggc
tataaaggcaaaattctccacttccttcaagatgcttcaattgctgaactgactctaatt
cctcagtgttctcagaaaaaggctcagagagtaatagaactccggccctttaatagttgg
gaagctctgtttataaagatgtccaaaatcaatggcctatctgaagatttgatatggaat
tgtaaaacactaattcaagaaagggatgtagttataagacttatgaacaaatgtgaagac
atttcaaataaattgaccaaacaagtaaccatgctcaccggaaatggaggcggatggaac
atagaacagccctccattctaaaccaaagtttatcactcaagccctatcagaaggttggt
ttgaattggctggcactggtgcataaacatggacttaatggcattttggcagatgaaatg
ggtctaggaaaaaccatccaagccattgcattcctggcgtacctctttcaggagggtaat
aaagggcctcatttgattgttgttccagcatcaaccatagataactggctaagagaagtt
aacttatggtgtcctactttaaatgtgctctgttactatggttctcaagaagagcgtaaa
caaattagattcaacatccataataaatatgaagattacaatgtaattgttacaacgtat
aattgtgcaatcagcagctctgatgatcgcagtctctttcgacggctgaaactgaattat
gcaatttttgatgaaggccatatgctgaagaatatgggctctatccgctaccagcactta
atgacaattaatgcaaataaccgtttactgctcacgggtacacctgtgcagaataatctg
ctagaactcatgtcgttgttgaattttgttatgccacacatgtttagtagtagcaccagt
gaaatccgaaggatgttttcttctaaaacgaaaccagcagatgagcagagcatatatgaa
aaggagagaatagcacatgcaaagcaaataataaagccttttattctcagaagagtcaaa
gaggaggttctcaagcagctgcctcctaagaaggatcagattgagctgtgtgcaatgtca
gagaagcaggagcaactctacttgggccttttcaacagacttaaaaagtccatcaacaat
ctggaaaaaaacacagaaatgtgcaatgtcatgatgcagttgagaaaaatggccaaccac
cctttattacatcgccagtattacacacccgagaagctgagggagatgtctcagctaatg
ctgaaggaacctacacattgtgaggctaaccctgacctgatctttgaagacatggaagtt
atgacagactttgaactacatatactttgtaaacagtatcgacacattaataattaccag
ttagacatggatttgattttagattctgggaaattccgaaccttaggatgcatcttgtct
gaattgaaacagaagggtgatagagttgtattattcagccagtttaccatgatgctggat
atattagaggttctcttaaagcatcatcaacataggtacctccgattagatggaaagact
cagatttcagaaaggattcatctaattgatgagtttaatacagatatggatatctttgta
tttctcttgtcaaccaaagctggtggattaggaataaatctgacttcagcaaatgttgtt
atacttcatgacattgattgcaatccatacaatgacaaacaagcagaagacaggtgccat
agagttggtcagactaaagaagtattagttattaaattaataagccaaggaaccattgaa
gagtccatgctaaaaattaaccaacagaagttgaaactagaacaagatatgaccacaata
gatgaagctgatgaaggaagtatgccagcagatatagccacattactaaaaacatcgatg
ggcctgtga
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