Arvicola amphibius (Eurasian water vole): 119806951
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Entry
119806951 CDS
T08327
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp01524
Platinum drug resistance
aamp03430
Mismatch repair
aamp05200
Pathways in cancer
aamp05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119806951 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119806951 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
119806951 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
119806951 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119806951 (Msh2)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119806951 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Tex_central_region
Motif
Other DBs
NCBI-GeneID:
119806951
NCBI-ProteinID:
XP_038174996
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All DBs
Position
2:complement(114139160..114193522)
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AA seq
933 aa
AA seq
DB search
MAVQPKETLQLEGAAEVGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGAKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGTKASKENDWHLA
FKASPGNLSQFEDILFGNNDMSSSIGIVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGNLRQVIQRGGILITERKRADFSSKDICQD
LNRLLKGKKGEQINSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTAFDFNQYM
KLDMAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDSELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRIYQGVNQLPSVLQA
LKKYQGRHEALLSAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LRDVMDSLEKKMQSVLISAARELGLDPSKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSALSSLNEEYTKNKGEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNAAPIPYVRPVILEKGKGRITLKASRHACVEVQDEVAFIPNDVHFEKD
AQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSILDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALASQIPTVNNLHVTALTSEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECARQKALELEEFQNIGTSQGRDEMEPAAKRRCLEREQGEKIIVEFLSKVKQVPFTDMS
EESIMLKLKQLKAEVVAKNNSFVNEIISRIKVT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcctaaggagacgctgcagttggagggcgcggcggaggtgggcttcgtg
cgcttcttcgagggcatgcctgagaagccgagcaccacggtgcgcctcttcgaccgcggc
gacttctacacggcgcacggcgaggacgcgctgctggcggcccgcgaggtgttcaagacc
cagggtgtgatcaagtacatgggtccggcaggggcaaagacactgcagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctggttcgtcagtatagagtt
gaagtttataagaataaagctggaactaaggcctccaaggagaacgactggcatttggca
tttaaggcttctcctggcaatctttctcagtttgaagacatcctttttggtaacaatgac
atgtcatcgtccattggcatcgtgggtgttaaaatgtccacagtcgatggtcagagacaa
gtcggagtcgggtatgtcgattccatccagaggaagctgggactgtgtgagttccctgat
aatgaccagttctccaacctcgaggcccttctgattcagattggaccaaaggaatgtgtt
ttacctggaggagagactgctggcgacatggggaatctgaggcaggttattcagagagga
gggattctgatcacagaaagaaagagagccgacttttcctctaaagacatatgccaggat
ctcaaccggttattaaaaggcaagaaaggcgaacagataaatagtgctgtcttaccagag
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactcttg
tcagatgattcaaattttggacagtttgaactgactgcttttgacttcaaccagtacatg
aaattagacatggcggcagttagagccctcaaccttttccagggttctgttgaagatacc
actggctctcagtctctggctgcattactgaataaatgcaaaactgctcaaggacaaaga
ttggttaaccagtggattaaacagcctctcatggacaagaacagaatagaagagagatta
aatttagtggaagcttttgtagaagattcagaactgaggcagactttacaggaggattta
cttcgtcgatttccagatcttaaccgacttgccaagaaatttcagagacaagcagcgaac
ttacaagactgttaccgaatatatcagggtgtgaaccagctccccagtgtcctacaggct
ctgaagaaataccaaggaagacacgaggcactgttgtcagcagtttttgtgactcctctt
actgatcttcgttctgatttttcaaaatttcaagaaatgatagaaacaacattggatatg
gatcaggtggaaaaccatgagtttcttgtaaagccctcgtttgatcctaacctgagtgaa
ctaagggacgtgatggacagcctggagaagaagatgcagtctgtgctaataagcgcagcc
cgggagcttggattggaccctagcaaacagattaagttggattccagcgcacagtttgga
tattattttcgtgttacctgcaaggaagaaaaagtccttcgcaacaataagaacttcagc
acagtggatattcagaagaacggggttaagttcaccaacagtgcactgtcttctttaaat
gaagaatatactaaaaataaaggcgaatatgaggaggcccagaatgccattgttaaagaa
atcgtcaatatatcttcaggctacgtagagccaatgcagacgctcaatgacgtgttagct
cagttagatgccgtagtcagctttgcgcacgtctcaaatgcagcacccattccttatgta
cggccggtcatcttggagaaaggaaaaggaaggattacactgaaagcctccaggcatgct
tgtgttgaagtccaagatgaagttgcatttatcccgaacgatgtgcactttgaaaaggat
gcccagatgtttcacataatcaccggtcccaacatgggaggtaaatccacatatattcgt
caaactggggtgattgtactcatggcccaaattggatgttttgtgccatgtgagtcagca
gaggtatccattttggattgcatcctggctcgagttggggctggtgacagtcagctaaaa
ggtgtctccacattcatggctgaaatgctggagactgcgtctattctcagatcagcaacc
aaagattccttaataatcattgatgaactgggaagaggaacatcgacttacgatgggttt
ggattagcatgggctatatcggagtacattgcaacgaagattggtgccttttgcatgttt
gcaacccattttcatgaacttactgctttggccagccagataccaaccgtgaataatttg
cacgttactgcactaacgagtgaagaaaccttaactatgctttaccaagttaaaaaaggt
gtctgcgatcagagtttcgggattcacgtggctgagcttgctaatttcccgcggcatgta
atagagtgtgccagacagaaagctctggagcttgaggagtttcagaacattggaacctct
cagggacgcgatgaaatggagccagccgccaagagacgctgcctggaaagagagcaaggt
gagaagattattgtggagttcctatctaaggtgaagcaagtgccctttactgacatgtcg
gaggagagtatcatgctgaagttgaaacagctgaaagccgaggtggtcgcaaagaataat
agtttcgtaaatgaaatcatttcacgaataaaggtcacatga
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