KEGG   Arvicola amphibius (Eurasian water vole): 119806959
Entry
119806959         CDS       T08327                                 
Symbol
Dctn1
Name
(RefSeq) dynactin subunit 1 isoform X1
  KO
K04648  dynactin 1
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04814  Motor proteins
aamp04962  Vasopressin-regulated water reabsorption
aamp05014  Amyotrophic lateral sclerosis
aamp05016  Huntington disease
aamp05022  Pathways of neurodegeneration - multiple diseases
aamp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    119806959 (Dctn1)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    119806959 (Dctn1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119806959 (Dctn1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    119806959 (Dctn1)
   05016 Huntington disease
    119806959 (Dctn1)
   05022 Pathways of neurodegeneration - multiple diseases
    119806959 (Dctn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aamp04131]
    119806959 (Dctn1)
   03036 Chromosome and associated proteins [BR:aamp03036]
    119806959 (Dctn1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aamp04812]
    119806959 (Dctn1)
Membrane trafficking [BR:aamp04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    119806959 (Dctn1)
Chromosome and associated proteins [BR:aamp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     119806959 (Dctn1)
Cytoskeleton proteins [BR:aamp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     119806959 (Dctn1)
SSDB
Motif
Pfam: Dynactin CAP_GLY
Other DBs
NCBI-GeneID: 119806959
NCBI-ProteinID: XP_038175006
LinkDB
Position
2:complement(64692651..64726155)
AA seq 1239 aa
MSAEAGARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRK
YFTCDEGHGIFVRQSQIQVFEDGADTTSPKTPDSSASKVLKREGADAATKTSKLPTRPAS
TGVTGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEE
EGLRAQVRDLEEKLETLRLKRSEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLK
EARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTT
DLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEK
KNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVREL
RETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTI
KKYRQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQME
VAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFDLSENCS
ERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHER
SLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPEDSTMQLADHIKFTQSAL
DCMSVEVVRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAAL
AFGSQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLPVAALEELAFKASEQI
YGSPSSSPYECLRQSCTILISTMNKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITD
AEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTR
LEETQTLLRKKEKDFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIA
TLVSGIAGGGTPGQAPGALPGQGLVKDSPLLLQQISAMRLHISQLQHENSILKGAQMKAS
LAALPPLHVAKLSLPPHEGPGGELVAGTLYRKTSQLLETLNQLSTHTHVIDITRTSPAAK
SPSAQLMEQVAQLKSLSDTIEKLKDEVLKETVTQRPGATVPTDFATFPSSAFLRAKEEQQ
DDTVYMGKVTFSCAAGLGQRHRLVLTQEQLHRLHSRLIS
NT seq 3720 nt   +upstreamnt  +downstreamnt
atgagtgcggaggcgggtgcccggcccctgcgggtaggctcccgtgtggaggtcattggg
aaaggccaccgaggcactgtggcctatgttggagccacactctttgccactggcaaatgg
gtgggcgtgatcctggatgaagcaaaaggcaagaacgacggcactgttcagggaaggaag
tatttcacgtgcgacgaaggccatggcatctttgtgcgccagtcccagatccaggtattt
gaagatggagcagatactacttccccgaagactcctgattcttcagcttcaaaggtcctc
aagagagagggagctgatgcagctacaaagaccagcaaattgcctactcgcccagccagt
actggggtgacgggggccagtagctccctgggcccctctggatcagcatcagccggtgaa
ctgagcagcagtgagcccagcaccccagctcagactccgctggcagcacccatcatcccc
acaccggccctcacctctcctggagcagcacctccacttccatctccctcgaaggaggag
gaagggctgagggcccaggtgcgggacctggaggagaagctggagaccctgcgtctgaaa
cgatcagaagacaaggcaaagctgaaagagctggagaagcacaagatccagctggagcag
gtgcaggaatggaagagcaaaatgcaggagcagcaggccgacctgcagcggcgcctcaaa
gaggcgcggaaggaagccaaggaggcgctggaggcaaaagagcgctacatggaggagatg
gcggacacggccgacgccattgagatggccactctggacaaggagatggccgaagagcgg
gccgagtctctgcagcaggaggtggaggctctgaaggagcgcgtggacgagctcaccaca
gacctggagatcctcaaggctgaaattgaagagaaaggctcagacggggccgcgtcaagc
taccagctcaagcagctagaggagcagaatgcccgcctgaaagacgccctggtgaggatg
cgagatctctcttcctcagagaagcaggagcatgtgaaactccaaaagctcatggaaaag
aagaaccaggagctggaggttgtgaggcagcagcgcgagcgtctccaggaggagctgagc
caggcagagagcaccatcgatgagctcaaggagcaggtggacgctgctctgggtgccgag
gaaatggtggagatgctgactgaccggaacctgaatctagaagagaaagtgcgggaattg
cgggagactgtgggggacttggaagcgatgaacgagatgaacgatgagctgcaggagaat
gcacgggagacagagctggagctgcgggagcagctggacatggcaggcgcccgagtacgg
gaggcccagaagcgtgtggaagccgcccaggagacagttgcggactatcagcaaactatc
aagaagtaccgccagttgaccgcacacctacaggatgtcaatcgggagctgacgaaccag
caggaagcgtctgtggagagacaacagcagccacctccagagacttttgatttcaaaatc
aagtttgctgagaccaaggctcatgccaaggcaattgagatggagttgagacagatggag
gtggcccaggccaaccggcacatgtccctgctgacggccttcatgcctgacagcttcctt
cggccaggtggagaccatgactgtgtcctggtgctgctacttatgccccgtctcatttgc
aaggcagagctcatccggaagcaggcccaggagaagtttgacctcagtgagaactgttca
gagcggcctgggcttcgcggagctgctggggagcagctgagctttgctgctgggctggta
tactcactgagtctgctgcaggccacactgcaccgttacgagcatgccctctctcagtgc
agtgtggacgtgtataagaaggtgggcagcctctaccctgagatgagtgcccacgagcgc
tccctagatttcctcatcgagctgctgcacaaggatcagctggatgaaactgtcaacgtg
gagcccctcaccaaggccatcaagtattaccagcatctgtacagcatccaccttgctgag
cagccggaggattccaccatgcagctggctgaccacatcaagttcacccagagtgccctg
gactgtatgagtgtggaggtggtgcggctgcgtgccttcctgcagggtgggcaggaggca
acagatattgcccttcttctccgagacctggaaacatcatgcagtgacatccgccagttc
tgcaagaagatccgaaggcgaatgccagggacagatgctccggggatcccagcagcattg
gcctttggatcacaggtgtccgacacactcctcgactgcaggaagcacttgacgtgggtg
gtggctgttctccaggaggtggcagctgcagccgcccagcttattgcccccttggcagag
aatgaggggctgcctgtggctgcattggaggagctggctttcaaagcaagcgagcagatc
tacgggagcccctccagcagtccctacgagtgcctgcgccagtcctgcaccatccttatc
agcacaatgaacaagctggccacagccatgcaggagggcgagtacgatgcagagcggccc
cccagcaagcctcctccggttgaacttcgggctgcagccctgcgtgcagagatcacagat
gctgaaggtctgggtttgaagcttgaagatagagagacagttatcaaggagttaaagaag
tctctcaagattaagggagaggagctgagtgaggccaacgtgcggctgagcctcctggag
aagaagctggacagcgctgccaaggatgcagatgagcgcattgagaaagtccagactcgg
ctggaggagactcagaccctgctgcgaaagaaggagaaagactttgaggagacaatggat
gcactccaggctgacatcgaccagttggaggcagagaaggcagagctaaagcagcggcta
aacagccagtccaagcgcacaattgaggggcttcggggtccccctccctcaggcattgct
accctggtctctggcattgctggtgggggcacgcctgggcaggctccaggcgccttgccg
ggccaggggctggtgaaggactcgccactgctgctccagcagatctccgccatgaggctg
cacatctcgcagctccagcatgagaacagcatcctcaaaggagcccagatgaaggcatcc
ttggccgctctgccccctttgcacgtcgcaaagctttccctcccgccccacgagggccct
ggtggtgagctggtggctgggacactgtatcgcaagaccagccagctactggagacacta
aaccagctgagcacgcacacgcatgtgatagatatcacacggaccagcccagctgccaag
agcccgtcagctcagcttatggagcaagtggctcagctcaagtccctgagtgacaccatt
gagaagctcaaggatgaggtcctcaaggagacagtaactcagcgtcctggagctactgtt
cccactgactttgccaccttcccttcatcagccttcctcagggccaaggaagagcagcag
gatgacacggtctatatgggcaaggtgaccttctcgtgtgcggccggcctaggacagcga
caccgtctggtgctgacccaggagcagctgcaccggctccacagtcgcctgatctcctaa

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