Arvicola amphibius (Eurasian water vole): 119806997
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Entry
119806997 CDS
T08327
Symbol
Rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119806997 (Rbbp6)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119806997 (Rbbp6)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
U-box type E3
119806997 (Rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119806997
NCBI-ProteinID:
XP_038175057
LinkDB
All DBs
Position
1:125107639..125141685
Genome browser
AA seq
1788 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSAHPTPSISSLSSNPSSLTPSVPGNPSSAPAPVPDITATVSISV
HSEKSDGPFRDSDNKLLPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVP
PPGFPPAPANMSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDE
FTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFS
RSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQS
PTKRNVPQGETEREYFNRYREVPPPYDIKAYYGRSVDFRDPFEKERYREWERKYREWYEK
YYKGYAVGAQPRPSANREDFSPERLLPLNIRNSPFTRGRREDYAAGQSHRNRNLAGNYPE
KLSTRDSHNQKDNTKSKEKDSENIPGDNKGNKHKKHRKRRKGEESESFLNPELLETSRKS
RESSGVDDTKTDALFVLPSRDDATPVRDEPMEAESITFKSVSEKDKREKDKPKVKSDKTK
RKSDGSATAKKENVSKPSKGPQEKIDGEREKSPRSEPPLKKAKEEAAKTDSVKPSSLSQK
DDKVTGTPRKAHSKSAKEHQETKPVKEEKVKRDSSKDIKSEKPASKDEKAKKPEKNKLLD
SKGEKRKRKTEEKNVDKDFESSSMKISKVEGAEILKPSPKRKMEGDVEKLERTPEKDKIT
SSTAPAKKIKLNRETGKKIGSAENTSATKEPSEKMESTSSKIKQEKVKGKAKRKVAGTEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK
WDKDDFESEEEDVKSTQPIQSVGKPSSIIKNVTTRPSAATKYTEKESEQSEKIQKLTKEV
SHEMAQHEVKSSKGSASSEKGRTKDRDHSVLEKEIPDKRKSSAQPEKESTVDRLSEQGNC
KNLSQSSKESRTSDKHESIRGSSNKDFTPGRDKKVDYDSREYSSSKRRDERNELARRKDS
PPRSKDSSSGQKSKPREEKDLPKKGTESKKSSSSPPRDKKPHDHKTPYDTKRSCEETKSV
DKTSGKEREKHAAEARNGKESSCSKLPYTPNPPDPTPAEKELVAGQVDKNTIKPKPQLSH
SSRLSSDLTRETDEAAFEPDYNESDSESNVSAKEEEAVSTVSKDLKEKAAEKAKESLTVA
VAGQPGADRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAGSQDSKKKKKKKEKKKHKK
HKKHKKHKKHAGADGDAEKSQKHKHKKKKAKKSKDKEKDDQKAKSVTV
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcactataaattttcctctaaactcaactacgacaccgtcacctttgat
gggcttcatatctccctctgcgacttaaagaagcagattatggggagagaaaagctgaaa
gctgccgatagcgatcttcagatcaccaacgcgcagacgaaggaagaatacactgatgat
aatgcgctaattcctaaaaactcatctgtaattgtcagaaggattcctattggaggtgtt
aagtccacaagcaagacatatgttataagtcgaactgaaccagtgatgggaactacaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaggaagataaaattaaagcaatgatgtcgcagtctggccat
gaatacgacccaatcaattacatgaagaaacctctaggcccaccacctccatcttatacc
tgtttccgttgtggtaaacctggtcattatattaagaattgcccaacaaacggggataag
aactttgagtctggccctagaatcaaaaagagtactggaattcctcgaagttttatgatg
gaagtgaaagaccctaacatgaaaggtgcaatgcttacgaacaccgggaaatacgcaatc
ccaactatagatgcagaggcctatgcaattgggaagaaagaaaagccacccttcttacca
gaggaaccatcatcatcttcagaagaagacgatcccatcccagatgagctcttgtgcctc
atctgcaaggacattatgactgatgctgttgtcattccctgctgtggaaacagttactgt
gatgaatgtattagaacagcactcctggaatcagatgaacatacgtgtccaacatgtcat
cagaacgatgtttctcctgatgctttaattgccaacaagtttttacgacaggctgttaat
aacttcaaaaatgaaactggctatacaaaaagactacgaaaacagttacctccaccccct
cccccaataccaccaccaagaccactcattcagcggaacctgcagcctctgatgagatct
ccaatatcaagacagcaggatcctctgatgattccagtgacgtcttcctcagctcaccca
actccctctatatcctcattaagttcaaatccatcttccttgactccttctgtgcctgga
aatccatcttctgccccagctccagtacctgatataactgcaacagtgtctatatcagtt
cattcagaaaagtcagatggtccttttcgggattctgataataaattattaccagctgct
gccctcgcatcagaacattctaagggagcctcctcaattgcaattactgctcttatggag
gaaaagggttaccaagtgcctgtccttggaactccatctttgttgggacagtcattatta
catggacagttgatccccacaactggtccagtaagaataaatgctgcacgcccaggaggt
ggtcgaccaggttgggaacattccaacaagcttgggtacctggtttctccaccacagcaa
attagaagaggggaaagaagttgttacagaagtataaaccgcgggcgacaccacagcgaa
cgatcacagaggactcaaggcccatcactaccagcaacaccagtctttgtgcctgttcca
ccacctcctttgtatccgccacctccccatacacttcctcttcctccaggtgttcctccc
ccacagttctctcctcagtttcctcctggccagcctccacctgcaggatatagtgtccct
cctccagggtttccaccagctcctgccaatatgtcaacaccttgggtgtcatcaggagtt
cagactgctcattcaaataccatccctacaacacaagcaccacctttgtccagggaagaa
ttctatagagagcaacgacgattaaaggaagaggaaaagaaaaagtccaagctagatgag
tttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtagg
cgctcattttccaggtctaaatctccctatagtggttcatcgtattcaagaagttcatac
acttactcaaagtcaagatctggctccacgcggtcccgctcttactctcgatccttcagc
cgctcgcactcccgttcctattcacgatcacctccataccccaggagaggcagaggcaag
agccgtaattaccgttcacggtccagatctcatggatatcaccgatctaggtcaaggtca
cctccatatagacgttatcattcacggtcaagatctcctcaagcatttaggggacagtct
cccactaaacgtaatgtacctcaaggagaaaccgagcgtgagtattttaatagatacaga
gaagttccacccccttacgacatcaaagcctattatggacggagtgtcgactttagagac
ccatttgagaaagaacgctaccgggaatgggagaggaaataccgagagtggtacgaaaag
tactacaaagggtatgctgtgggggcacagcctagaccctcagctaaccgcgaggacttc
tccccagagagacttttacctcttaatatcagaaattctccctttacaagagggcgcaga
gaagactatgctgctggacaaagtcatagaaatagaaatctagctggcaactatccagaa
aagctttcaacaagagatagtcacaatcagaaagataacacaaaatcaaaagagaaggat
agtgagaacattccaggagacaataaaggaaacaagcataagaaacacagaaaacgaaga
aagggggaggagagtgagagcttcctgaaccccgaactgttagaaacatccaggaaatcc
agggagtcatcaggcgttgatgacactaagacagatgcactgtttgttctcccaagtcga
gatgatgctacacctgttagggatgaaccaatggaggcagaatcaatcaccttcaaatca
gtgtctgaaaaagacaagagagaaaaagataagccaaaagttaaaagtgacaagaccaaa
cggaaaagtgacggatctgccacagccaagaaggaaaatgtttcaaaaccttctaaagga
ccccaagaaaaaatagatggggagcgtgaaaaatctccacggtctgaacctccacttaaa
aaagccaaagaggaggccgcaaagactgactctgtaaaaccttcatcattgtctcagaag
gatgacaaggtcaccggaactcccagaaaagcccactctaagtctgcaaaagaacatcag
gagacaaagccagtcaaggaggagaaggtgaaaagggacagttccaaagacatcaagtca
gaaaagccagccagtaaggatgaaaaagccaagaagcctgagaaaaataagctgcttgat
agcaagggagaaaaaagaaagagaaaaactgaagaaaagaatgtagacaaagattttgag
tcatcgtcaatgaaaatctctaaagtggaaggagctgaaatactgaaaccatcaccaaag
cgcaaaatggaaggtgatgttgaaaagctagaaaggaccccagaaaaggacaagatcaca
tcatcgactgccccagccaaaaaaatcaaacttaacagagaaactgggaaaaaaattgga
agtgcagaaaatacatctgctacaaaagaaccctctgaaaaaatggagtcaacatctagc
aagattaaacaggaaaaagtcaagggaaaggccaagcgaaaagtagctgggactgaaggc
tccagctccacgcttgtggattataccagtacaagctcaactggaggcagccctgtgcgg
aaatctgaagaaaagacagatacaaagagaacagtcattaaaactatggaggaatataat
aatgataatacagctcctgctgaagatgttataattatgatccaggttcctcagtccaaa
tgggataaagatgactttgaatctgaagaagaagatgttaaatcgacacaacctatacag
agtgtagggaaaccatctagtattataaaaaatgttactactaggccctcagctgcaacc
aagtacaccgagaaagaaagtgagcagtcagagaaaattcagaagctcaccaaggaggtg
agccatgaaatggcacaacacgaggtcaaaagctcaaaaggctctgcgtccagtgaaaag
gggagaaccaaagaccgggaccactcggtactagagaaggaaatccccgacaagaggaag
agcagcgcccagccagagaaggagagcactgtggaccgtctgagtgaacagggaaattgt
aagaatctgtctcagtcttccaaagagtccaggacttcagataagcatgaatccattcgt
ggttcctcaaataaagacttcactcctggtagagataagaaagtggactatgacagcaga
gaatattccagttccaagcgaagagatgagagaaatgagctagcaagaaggaaggactct
cctcctcggagtaaagattcttcatctggacagaaaagtaagccaagggaggagaaagat
ttgcctaaaaaggggacagagtccaaaaaaagcagttctagtcccccaagagacaaaaag
cctcatgatcataaaaccccctacgataccaaacgctcatgtgaagagacaaagtctgta
gataaaacctctggcaaggaacgggagaagcatgctgctgaggctcgaaacgggaaagag
tccagctgcagcaagttgccgtatacaccgaacccaccagatcccactccagctgagaaa
gagctggtggctggacaggtggataagaacaccatcaagccaaaaccccagttgagtcat
tcctctcgactttcctctgatctaactagagagaccgatgaggctgcctttgaaccagac
tataatgagagtgacagcgagagtaatgtgtctgcgaaggaagaggaggctgtctccact
gtctccaaggacttgaaagagaaagcagcagagaaagcgaaggagagcttgactgtagca
gtggccggccagccaggtgcagacaggagccagagtcagagtagccccagtgttagtcca
agtagaagtcacagcccttccggtagccagacccgaagccatagcagcagtgccagctca
gcaggaagccaagacagcaagaagaaaaagaagaaaaaagagaagaagaagcacaagaag
cataaaaagcacaagaagcataagaagcatgcaggtgcggatggtgacgccgagaagagc
cagaaacacaaacacaagaagaagaaggcaaagaagagcaaggacaaggagaaagatgac
caaaaagcgaaatctgtcactgtgtga
DBGET
integrated database retrieval system
