Arvicola amphibius (Eurasian water vole): 119807134
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Entry
119807134 CDS
T08327
Symbol
Dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119807134 (Dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119807134 (Dcp1b)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119807134 (Dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
119807134 (Dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
PilM
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
119807134
NCBI-ProteinID:
XP_041910456
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Position
2:complement(28780156..28820616)
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AA seq
644 aa
AA seq
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MAAAAGGLPGKGHDISLAALQRHDPYISRIVDVASQVALYTFFHRANKWEKTDVEGTLFV
YTRSASPKHGFTIMNRLSMENRTEPITKDLDLQLQDPFLLYRNATLSIYGIWFYDKEECQ
RIAKLMKNLSQCEQLKACHGAGAGSSPVTLSSGEGREVDILQMLTKAKDEYTKCRSCSEP
KQMTSSSAICDNPKLIKPVPVRPSSSQRLQEPSPNKTSDPEPQHLSLTALFGKQDKAPCH
ETLKPSQTFAHHHHHHLHHHQHQQQEQLLVHQRVACSLPYEERRKLSLPVEKQLCPAIQK
LMVGNTGLHLLPQHPEQWPCESGSPSRVGGVPPGPVQLGSPWNCRTARCAQSTAHCAQST
ARCAQSTACCAQSTACCAQSTARCAQSTCRNHKLLEQLHGASGAAHKCKPCAPARPSAAT
QVTPGQIAAQSQLVYFSGPLPPPAPGHEALRKEQCVLPAQALPFSGNQESSPSVLPTQEL
LRKLQAVHQEQQLQAIPRPALAARFPVSAQGSGTEKPLEAWASKTASVENQAPLLQITSA
QCVPAPVASLLMPPVVLTQSTCAPLRETESGLMPLGGQELPDASSSLLLPLQNWESSTVA
SRPLTRLQLQEALLNLIQNDDSFLSIIYDAYLFSVTQAAMRKAT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgccggtgggctgcctgggaaggggcatgatatcagcctggcggccctg
cagcgccacgatccctacatcagtcgcatcgtggatgtggccagccaggtggctctgtac
actttcttccatcgggccaacaagtgggagaagactgatgtggaaggaaccttatttgtt
tatacaaggtctgcctctccaaagcacggattcaccattatgaataggctcagcatggag
aacaggacagaacccattactaaagacctggacctccagctccaggaccctttccttctc
tacagaaatgccacattgtccatttatggaatttggttttatgataaggaagagtgccaa
agaattgcaaaactgatgaaaaacctcagtcagtgtgaacagctgaaggcctgtcatggc
gctggagcaggatcctccccagtgaccctgagttcaggagagggtagagaagtagatatc
ttacagatgctcacgaaggccaaggatgagtacacaaagtgtaggagttgttctgagcca
aaacagatgaccagctcttccgccatctgtgacaaccccaagcttatcaagcctgtgccc
gtgagacccagtagcagccagaggctgcaagagccctctcccaacaagacctcggaccct
gagccccaacacttatctttgacagctctgtttgggaaacaagacaaagctccctgtcac
gaaactctgaaaccttcccagaccttcgcccaccaccatcaccaccacctccaccaccac
cagcatcagcagcaagaacagcttctagttcatcaaagagttgcatgctccctgccctat
gaagagcgcagaaagctctcactccccgtggagaagcagctatgcccagccattcagaaa
ctcatggtcgggaacacagggctgcacctgctgccacagcaccctgaacagtggccctgt
gaaagtggcagccccagtcgtgtggggggagttcctcccggtcctgtccagctggggtcc
ccctggaactgtaggactgcccgctgtgcacagagcactgcccactgtgcacagagcact
gcccgctgtgcacagagcactgcctgctgtgcacagagcactgcctgctgtgcacagagc
actgcccgctgtgcacagagcacttgcagaaaccacaagctactagagcagcttcacggt
gcctctggggcagcgcacaagtgtaagccctgtgcacctgccaggccgtctgcagccact
caggtgactccaggccaaattgcggcccagtcacagctggtgtacttcagtggtcccctt
cctcctcccgcaccaggacatgaagctctcaggaaggagcagtgtgtactcccagcacaa
gcactgcccttctctggcaaccaggagagcagccccagtgtgctccccactcaggagctg
ctgagaaagctccaggccgtacatcaggagcagcagctccaggcgatcccccggccagcc
ttagctgccaggttccccgtgtcagcccagggctcagggacagaaaagcccttggaagcc
tgggccagcaagacagccagcgtggagaaccaggctcctcttctgcagatcacctcagct
cagtgtgtccctgctccagtggcttctctgctgatgccccctgtggttctcacacagtcc
acctgtgccccactgagggagactgaatccgggctcatgcccctaggaggccaagaactt
cctgatgcctcctccagcctccttctgcccctgcagaactgggaatcctccaccgtggcc
agcaggcccctcaccaggctgcagctccaggaggcactgctgaacctcatccagaatgat
gacagcttcttaagcataatctatgatgcctatctcttcagtgtgacacaagccgccatg
aggaaagccacgtaa
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