Arvicola amphibius (Eurasian water vole): 119807146
Help
Entry
119807146 CDS
T08327
Symbol
Taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119807146 (Taf1b)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
119807146 (Taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
CoV_NSP2_N
Zn_ribbon_NOB1
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
119807146
NCBI-ProteinID:
XP_038175214
LinkDB
All DBs
Position
2:complement(99183701..99245655)
Genome browser
AA seq
588 aa
AA seq
DB search
MDLEQAKSFTDRCSQCDAVSWGLTDERKYYCTSCHNVTDRSEEVVSTAVIPNTKINSINR
GLRKRSRHEKGWDWYVCEGFQCILYHQAEALKTLGVGPELKDKVLHNFWKRYLQKSKQAY
CKNPVRTSRKKAKVLEDNQQSSDWASELELLSDTSYPLESEAEFQSEPQTPKPFPVTKAS
PKSEATDVCSGSVDGVEYSEWKEKGVLKMTVPRTLALCSLSLLWQREAITLSDLLRFVEE
DRIPYRNAFQLFPEEMKVYGRDKGIFAIESWPDYEDIYKNMIEVAIFLDLPRFPDITEDC
YLHPNVLCMKYLLELNLPDEMHSLTCQVVKMTGIGEVDFLTFDPIAKKKRTVRYDVQAAA
VIVVVLKLLFLLDDKLEWSYSGLAETYNEEHKEDKQQFDFRKWYQVMKKTFDEKRRQWEE
ARAKYYWKTKRPIYRSHIDKSVMYKRREMVKNLQKQFSALLGATPAVEKKAPSSFQFSWT
EGDTDSPCFHGHSLQGLLITKGQSLITKNSLYWLSTQKFCKSYCKHVTTYEESNFSLSYQ
FILNIFSFLLRIKTSVLHEEVSLIEKKLFEKKYNESKKRSRPKKVRRH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggatctggagcaggcgaaatcgttcacagaccgctgttcgcaatgtgatgctgtttcc
tggggccttactgatgaacgaaaatactattgtacttcctgccacaatgtcacagatcga
tctgaggaagttgtgagcactgcagttattcccaataccaagatcaactccatcaacagg
gggctgaggaagagaagcaggcacgagaaaggctgggattggtatgtgtgtgaaggtttt
cagtgcatactttaccaccaggctgaggccctgaagacccttggagtaggcccagagcta
aaggacaaagttttacacaatttttggaagcgttatcttcagaagagcaagcaggcctat
tgtaaaaacccagttcgtacaagcagaaagaaagccaaggtattggaagacaatcagcag
agttcagattgggccagtgaacttgagctgctaagtgacacctcctatccccttgaaagt
gaagcagagttccagtctgagccccagactccaaagcctttccctgtcaccaaagcatca
ccaaagtcagaagccacagatgtctgttctggatctgttgacggagtggaatactcagag
tggaaggagaaaggtgtcttgaagatgactgtccccaggactctggctctctgctctctg
tctttgctctggcagagagaagccattactctctctgaccttctgaggtttgttgaagag
gaccgcattccatacagaaatgcttttcagctttttccagaagagatgaaagtctatggt
cgggataaaggcatctttgctattgagtcttggcctgactatgaagacatctataaaaac
atgattgaagtcgccatatttttagatttacctcgttttccagacataactgaagactgc
taccttcatcccaacgtcttgtgcatgaaatatttactggagctcaatctccctgacgaa
atgcacagtttgacctgccaagtggtaaagatgactggaatcggagaagtggacttcctg
acatttgaccctatagccaaaaagaaaaggacagttagatacgacgtgcaggctgcagct
gtcattgtggtggtgttgaaactactctttttgctggatgacaaattagaatggtcttac
tctgggcttgctgaaacatataatgaagaacacaaagaagataaacagcagtttgatttc
agaaaatggtaccaagttatgaagaaaacctttgatgagaaaagacgacaatgggaagaa
gcaagggccaaatattattggaaaaccaaaagaccgatctaccgttcgcacattgacaag
tcagtcatgtataagagaagagaaatggtgaagaatcttcagaagcaattcagtgccctg
cttggcgcaacacctgcggtggaaaagaaggccccttcaagttttcagttcagctggact
gaaggagacactgatagcccttgtttccatggacacagcctccagggactcctgataacg
aaaggccagtccttgataaccaagaactcactgtattggctcagtacccagaaattctgc
aaaagctactgtaaacatgtgacaacctatgaagaatcaaatttttctctgagttaccag
tttatactaaatatcttctcattcttactaagaataaagacttctgttctccatgaagaa
gtgagcttaattgaaaagaaactttttgaaaaaaaatacaatgaatcaaaaaagaggtca
agacccaagaaagtaagaagacactga
DBGET
integrated database retrieval system
