Arvicola amphibius (Eurasian water vole): 119807322
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Entry
119807322 CDS
T08327
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119807322 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119807322 (Trim54)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119807322 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
PHP
Mod_r
DUF349
UvrD_C
SpoIISA_toxin
COG2_C
Zn_ribbon_FGT1_2
DUF5799
DUF1421
FUSC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
119807322
NCBI-ProteinID:
XP_038175295
LinkDB
All DBs
Position
2:complement(131444251..131468546)
Genome browser
AA seq
383 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEVSSKLVETAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFQPGAAGDEEDDEVTLEGDESNAGLEEERLDGP
EGERVGRRLWGEEWLVILRLLPS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacggtgggtttcaagccgctgctcggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgatgtcttccaggcctctaaccct
ctgtggcaatcccgcggctccacaactgtatcttcgggcggtcgcttccgctgcccatct
tgcaggcatgaggttgtcctggaccggcatggggtctacggcctgcagcggaacctcctg
gtggagaacattattgacatctacaagcaggaatcctcccggccgctgcactccaaggct
gagcagcacctcatgtgtgaggagcacgaggatgagaagatcaacatctactgcctgagt
tgcgaggtgcccacctgctctctctgcaaggtctttggggcccacaaggactgtgaggtg
gcccctctgcccaccatttacaaacgccagaagagcgagctgagcgatggcatcgcgatg
ctggtggcaggcaatgaccgcgtgcaagcagtgatcacgcagatggaggaggtgtgccag
accattgaggacaacagccgcaggcagaagcaattattaaatcagaggttcgagaccctg
tgcgcggtgctggaagagcgcaagggcgagctgctgcaagcgctggcccgggagcaggag
gagaagctgcagcgcgtgcgaggcctcatccgtcagtacggagaccacttggaggtttcc
tctaagctggtggagaccgccatccagtccatggaggagccgcagatggctctctacctc
cagcaggccaaggagctgatcaacaaggtcggagcaatgtcgaaggtggagctagcagga
cggccggagccaggctatgagagcatggaacaattctctgtgagcgtggagcacgtggcc
gaaatgctgcggaccatcgacttccagccgggcgccgcaggggatgaagaggatgacgag
gtgactttagaaggggacgagagcaacgcagggctggaggaggagcggctggacgggcca
gaaggtgagagagtaggacgaaggctttggggtgaggagtggttagtcattctccggcta
ttgccttcctag
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integrated database retrieval system
