Arvicola amphibius (Eurasian water vole): 119807488
Help
Entry
119807488 CDS
T08327
Symbol
Fancd2
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group D2 protein
KO
K10891
fanconi anemia group D2 protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119807488 (Fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119807488 (Fancd2)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
119807488 (Fancd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
RPN5_C
Motif
Other DBs
NCBI-GeneID:
119807488
NCBI-ProteinID:
XP_041910515
LinkDB
All DBs
Position
2:complement(34498088..34581824)
Genome browser
AA seq
1453 aa
AA seq
DB search
MVSKRRRSDSEDKENITEDASKIIKQPLSKLAKKSHGSHEVEENGSVFVRLLKTSGLTLK
TGENQNQLGVDQIIFQRKLFQALRKHPSYPKVIEEFVNGLESYIEDCDSLRNCLLSCERL
QDEEASTGAFYSKSLIKLLLGIDILQPAIIKVLFEKVPQFLFENESSDGINMSRLIINQL
KWLDRIVDSKDLTTQMMQLISVAPVNLQHDFITSLPEILGDSQHANVGKELSELLIQNTS
LTVPILDVFSSLRLDSKFLSEIRQLVMGKLSSVRLEDLPVIVKFILHSVTDTTSLEVISE
LREKLNVQHFILPSRVQASQSKLKSKGLASSSGDQENSDKDCIVLVFDVIKSAIRYEKTI
SEAWIKAIERIESAPEHKTLDVAMLLIIYSTSTQTKKSIEKVLRNKIQLGCIQDQLLDST
FSTHYLVLKDICPSIFLLAQTLFHSQDQRIILFGSLLYKYTFKFFDTYCQQEVVGALVTH
ICSGNEAEVDTALDVLLELIVLNPSAMRLNAVFVKGTLDYLENMSPQQIRKIFCILSTLA
FSQQPGTSNHIQDEMHLVIRKQLSSTVFKYKLIGIIGAVTMAGVMAEDRSVPSNPAQRGA
DPSNEWCTQVTSLLQLVHSCTEHSPWASSLYYDEFANLIQERKLAPKTLEWVGQTIFNDF
QDAFVVDFCAVPEGDFPFPVKALYGLEEYSSQDGIVINLLPLFFREFADISQVTSREPSQ
KSMSPLCLASHFRLLRLCVARQHNGNLDEIDGLLDCPLFLPDLEPGEKLESMSAKERSLM
CSLTFLTFNWFREVVNAFCQQTSPEMRGKVLSRLKDLVELQEILEKYLAVTPDYVPPFAN
VDLATLDMIPWSGSAVSTKNRNKGKMGARKQKADSSKASSTEALLTEDTSECDTMPTGRS
QVDKESTAKEGKTFVSLQNYRAFFRELDIEVFSILHSGLVTKFILDTEMHTKATEVVQLG
PAELLFLLEDLSQKLENILTPSFAKRMCFLKNKGSRKIGFSHLHQRSVQDIVRCVVQLLT
PMCDHLENIHNYFQSLSAENLSVDDRPGVEAQEHLTMSSCYQKLLQILHTFFAWKGFTHH
SNHHLLHSALEVLTSRLKQTEQKQPLEELVSQSFSYLQNFHHYIPSFQCGLYLLRLLMAL
LEKSAVPTQKKEKLASLAKQLLCRAWPHGEREKSTNFNDHLNDLLCIYLEHTDNVLKAIE
EIAGVGVPELVNAPKDGSSSTFPTLTRHTFVIFLRVMMAELEKTVKGLQAGTATDSQQVH
EKKLLYWNMAVRDFSILINLMKVFDSYPVLHVCLKYGRHFVEAFXKQCMPLLDFSFRKHR
EDVLSLLETLQLNTRLLHHLCGHSKIHQDTRLTKHVPLLKKSLELLVCRVKAMLVLNNCR
EAFWLGTLKNRDLQGEEIISQCPSSPESTSEDSEDSVSKNRATELSAQAGLDGEDEASDG
QKDEDDESDGSSE
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggtttccaaaagaagacggtcagactctgaggataaagaaaacataacagaagatgcc
tccaaaatcataaaacaacccctttccaagctggcaaaaaaatctcatggttctcatgaa
gttgaagaaaatggcagtgtctttgtaaggcttcttaagacatcaggactcactcttaag
actggagagaaccaaaatcagctaggtgtggatcagataatcttccaaaggaagctcttt
caggccttgaggaaacatccttcttatcccaaagtaatagaagaatttgttaatggcctg
gagtcctatattgaggactgtgacagtctcaggaactgcctcttatcttgtgagcgcctg
caggatgaggaagcgagcaccggcgcattttactccaagagtctcatcaagctccttctg
gggattgacattttacagcctgccattatcaaagtgttatttgaaaaagtgccacagttt
ctttttgaaaacgagagcagtgatggaatcaacatgtcccgactcattatcaaccaacta
aaatggctggacagaattgtagatagcaaggacctcacaacccagatgatgcagttgatc
agtgttgctccagtgaacttacagcatgacttcatcaccagccttcctgagatcctaggg
gattcccagcatgctaacgtgggaaaagaactcagtgagctgctgattcagaatacttca
ttgactgtcccaattttggatgtcttttccagtctccgacttgactcaaaattcttgtct
gagatccgccagttggtgatgggcaagctgtcttctgttcggctggaggatttaccagtg
atagtaaagttcattcttcattctgtaacagacactacttcacttgaggtcatttctgag
cttcgggagaagttaaatgtgcagcattttattttgccatcacgggttcaggcttcccaa
agcaagttgaaaagtaaaggactagcaagctcttcaggagatcaagaaaacagtgataaa
gactgtattgttctcgtctttgatgtaatcaagtcagccattaggtatgagaaaaccatt
tcggaagcctggattaaggccatcgagcgcattgagtcagcgcctgagcataagactttg
gacgtggcaatgctgctcattatctacagcaccagcacgcagacaaagaagagcattgaa
aaggtgctgagaaacaagattcagttgggctgcattcaagaccagctgctggacagtaca
ttctccacacattacttggttcttaaggatatttgcccatccattttcttactggctcag
actttgtttcactctcaggaccagaggataattttgtttggcagtctcctatacaaatat
acttttaaattttttgatacttattgccagcaggaagtggttggtgctctggtcacccac
atttgcagtgggaatgaggctgaagttgatactgcgttggatgtcctccttgagctgatt
gtactaaacccctctgctatgaggctcaatgctgtttttgttaagggaactttagattat
ttggagaatatgtcccctcagcaaatacgaaaaatcttctgtattctcagcacactagca
tttagccaacagcctggaaccagcaaccatatccaggacgaaatgcacctggtgatacga
aagcagctctctagcactgtgttcaaatacaaactcatcgggatcatcggtgcagtcacc
atggccggcgtcatggcagaagacagaagtgtaccatctaatccagcccagaggggagct
gacccaagcaatgaatggtgcacacaggtgacttctttgctacaactggttcattcttgt
actgagcattctccttgggcctcttctctttattatgatgaatttgccaatctgatccaa
gaaagaaagttggctccaaaaaccttggaatgggttgggcagaccatctttaatgatttc
caagatgcctttgtggtggacttctgtgctgttccagaaggtgactttccatttcctgtg
aaagctctctatggactggaagaatacagctctcaagatggcattgtcatcaacctccta
ccactgttctttcgggagtttgcagatatcagtcaagtgacttcacgagaaccaagccaa
aaatcgatgtctcctttgtgcctggcatcccatttccggctgctgagactttgtgtggca
agacaacataacggaaacttggatgagattgatggtctcttagattgccctctgttcctc
cctgacctggaacctggagagaaactggagtccatgtctgccaaagagcggtcacttatg
tgttcactcacgttccttactttcaactggttcagagaggttgtgaatgccttctgccaa
caaacatctcctgagatgaggggcaaagttcttagtcggctaaaggaccttgtggaactt
caggaaatcctagagaagtacttggcagtcaccccagactatgttccacctttcgcaaat
gtcgacttggctactttagatatgataccttggagcggttctgctgtttcaaccaaaaac
agaaacaaaggaaagatgggggcaaggaaacaaaaagctgatagcagcaaagcatcctcc
actgaagcacttctaacagaagacacttcagaatgtgacaccatgccaaccggtagaagc
caagtagacaaggagtccacagcaaaggaaggaaagacatttgtgtcactgcagaattac
cgtgctttttttcgagagctggacattgaagtcttctctattcttcattctggacttgtg
accaagttcatcttagacactgaaatgcacaccaaagcaacggaagttgtccagctcggg
cctgcagagttgcttttcctgctggaagatctttcccagaagttagagaatatactgaca
ccttcttttgccaagagaatgtgcttcctcaagaataaaggaagccggaaaattggattc
tcacatcttcatcagagatctgtccaggacattgttcgttgtgttgttcaactgctaacc
ccaatgtgtgaccatctggagaacattcataactacttccagagcttaagtgctgaaaat
ctcagtgtagacgacaggccaggagtggaagcccaggagcacctcaccatgtcttcctgc
taccagaagctgctgcagatcttgcatacgttctttgcgtggaaaggatttactcaccac
tcaaaccatcatctcctgcactcagccctggaggtcctcacaagcaggctaaagcagacg
gaacagaagcaacccttggaggaactggtcagccagagcttcagttacttgcaaaatttc
caccactacattcccagtttccagtgtggtctttatcttctcagacttttgatggctctt
ctggagaaatctgcagtacctacccagaagaaagaaaaacttgcctccctggccaaacaa
cttctctgtcgtgcatggcctcatggggaaagagagaagagcaccaattttaatgatcac
ctgaatgatttgctttgcatctacctggagcacacagacaatgttctgaaggccatagag
gagatcgctggtgttggtgtcccagaactggtcaatgcaccgaaagatggatcttcctct
acatttcctacgttgaccaggcacaccttcgtcattttcctccgtgtgatgatggctgaa
ctcgagaagacagtgaaaggtcttcaggctggcacagcaacagattcccagcaggttcat
gaaaagaagctcctgtattggaacatggctgttcgagacttcagtatcctcatcaatttg
atgaaagtattcgacagttatcctgttctgcacgtgtgtttaaagtatggacgtcacttt
gtggaagcatttnctaagcagtgtatgccgctcctcgacttcagctttcggaaacatcgg
gaagatgttctgagcttgctggaaacccttcagctgaacacaagactccttcatcacctt
tgtggacattccaagattcaccaggacacaagactcaccaaacatgtgcctttactcaaa
aagtccctggagctgttagtttgcagagtcaaagccatgcttgtcctcaacaattgtaga
gaggctttctggttgggtactctcaaaaaccgagacttacagggtgaagaaattatttcc
cagtgtccctcttccccagaaagcacttcagaggacagtgaggatagcgtctccaagaac
agagcaacagaattatctgcacaggctggtctggatggggaagatgaagcaagtgatgga
cagaaggatgaagatgatgagagtgatggcagctctgagtag
DBGET
integrated database retrieval system
