KEGG   Arvicola amphibius (Eurasian water vole): 119807507
Entry
119807507         CDS       T08327                                 
Symbol
Sf3b6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119807507 (Sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aamp03041]
    119807507 (Sf3b6)
Spliceosome [BR:aamp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119807507 (Sf3b6)
 Complex B
    119807507 (Sf3b6)
 Complex C
   U2 SnRNP specific factors
    119807507 (Sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_MUD2_C RRM_ACIN1 RRM_SRRT RRM_7 DUF8400
Other DBs
NCBI-GeneID: 119807507
NCBI-ProteinID: XP_038175430
LinkDB
Position
2:134026824..134035108
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcggccaagagggcgaatattcgcctcccacctgaagtaaatagaatt
ttatatataaggaatttgccatataaaatcacagcggaagaaatgtatgatatatttggg
aaatatggacctattcgtcaaatcagagtaggaaatacacctgagaccagaggaacagca
tatgtggtctatgaagatatcttcgatgctaagaatgcatgtgaccatttatcgggattc
aacgtgtgtaacagatacctcgtggttttgtactataatgctaaccgggccttccagaag
atggacaccaagaagaaggaggagcagctgaagcttctcaaggaaaagtatggcatcaac
acagatcccccaaaatga

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