Arvicola amphibius (Eurasian water vole): 119807508
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Entry
119807508 CDS
T08327
Symbol
Smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04340
Hedgehog signaling pathway
aamp04360
Axon guidance
aamp05200
Pathways in cancer
aamp05205
Proteoglycans in cancer
aamp05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119807508 (Smo)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119807508 (Smo)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119807508 (Smo)
05205 Proteoglycans in cancer
119807508 (Smo)
09162 Cancer: specific types
05217 Basal cell carcinoma
119807508 (Smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
aamp04030
]
119807508 (Smo)
G protein-coupled receptors [BR:
aamp04030
]
Frizzled / Smoothened family
119807508 (Smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
7tm_2
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
119807508
NCBI-ProteinID:
XP_038175431
LinkDB
All DBs
Position
2:176833081..176855191
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AA seq
793 aa
AA seq
DB search
MAAARPARGPELASPRLLQLLLVVLLGGPGRGTALSGNATGPGPRSAGGSGRRNAPVTSP
PPPLLSHCGRAAHCEPLRYNVCLGSALPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAP
RCWAVIQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPE
GCPNEVQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLYTEAEHQDMHSYIAS
FGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCR
ADGTMRFGEPTSSETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGK
TSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGG
YFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFN
QAEWERSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWV
WTKATLLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSH
DGPVAGLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEQANLWL
VEAEISPELEKRLGRKKKRRKRKKEVCPLGPAPELHHPAPAPAPSAVPRLPQLPRQKCLV
AANAWGTGEPCRQGAWTLVSNPFCPEPSPHQDPFLPGASAPKVWAQGRLQGLGSIHSRTN
LMEAELLDADSDF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcccgccccgcgcgtgggcccgagctggcgtccccgaggctgctgcagttg
ctgctggtggtactgctggggggcccgggtcgggggacggccttgagcgggaacgcgacc
gggcctgggcctcgaagcgccggcgggagcgggaggaggaacgcgccggtgaccagccct
ccgccgccgttgctgagccactgtggccgggccgcccactgcgaacctctgcgctacaac
gtgtgcctgggctcggcgctgccctacggagccacctccacgctgctggctggggactcg
gactcccaggaggaagcgcacggcaagctcgtgctctggtcgggcctccggaatgccccc
cgctgttgggcagtgattcagcccctgctatgtgctgtctacatgcccaagtgtgagaat
gaccgagtggagctgcccagccgcaccctctgccaggccacccgaggcccctgtgccatt
gtggagcgggagcgaggatggcctgacttcctgcgttgcaccccggaccatttccccgaa
ggctgcccaaacgaggtgcagaacatcaagttcaacagctcaggccaatgcgaagcccca
ttggtgcggacagacaaccccaagagctggtacgaggatgtggaaggctgcgggatccag
tgccagaacccgctctacaccgaggccgaacaccaggacatgcacagctacatcgcgtcc
ttcggggcggtcacaggtctctgcacactcttcacactggccacctttgtggctgactgg
cggaactccaatcgctaccccgcggttattctcttctatgtcaatgcatgtttcttcgtg
ggcagcattggctggctggcccagttcatggatggtgcccgtcgggagattgtttgccga
gcagatggcaccatgagatttggggagcccacctccagcgagaccctgtcgtgtgtcatc
atcttcgtcatcgtgtactatgccttgatggcgggagtggtctggttcgtggtcctcacc
tatgcctggcacacttccttcaaagccctgggtaccacctaccagcctctctcaggcaag
acctcctacttccacctgctcacatggtcactcccctttgtcctcactgtggcaatcctc
gctgtggcccaggtagatggagactctgtgagtggcatctgttttgtgggctacaagaac
taccgctaccgtgctggctttgtgctggcccccattggcttggtgcttatcgtgggaggc
tactttctcatccgaggggtcatgactctgttctccatcaagagcaaccaccctgggctt
ctgagtgagaaggctgccagcaagatcaatgagaccatgctgcgcctgggcatttttggc
ttcctggcttttggctttgtgctcatcaccttcagctgccacttctatgacttcttcaac
caggctgagtgggagcgtagcttccgggactatgtgctgtgccaggccaatgtgaccatt
gggttgcctaccaagaagcccattccagactgtgagatcaagaatcggcccagcctcctg
gtagagaagatcaatctgtttgccatgtttggcactggcattgccatgagcacctgggtc
tggaccaaggccacactgctcatctggaggcgcacctggtgcaggctgactgggcagagt
gacgatgagcccaagaggatcaagaagagcaagatgattgccaaggctttctctaagcgg
cgtgagctgctgcagaacccgggccaggagctctccttcagcatgcacactgtctcccat
gacgggcctgtggcgggtttggcttttgacctcaacgaaccttcagcggacgtctcctct
gcctgggcccagcatgtcaccaaaatggtggctcggagaggagccatactgccccaggat
gtgtctgttacccctgtggcaactccagtgccaccagaggaacaagccaacctgtggctg
gttgaggcagagatctccccagagctagagaagcgcttgggccggaagaagaagcggagg
aagaggaagaaggaggtgtgcccactgggaccagctcccgagcttcaccaccctgcccct
gcccctgcccccagtgcagttcctcggctgcctcagctgccccggcagaagtgcctggtg
gctgcaaatgcctggggaacaggggagccctgccgacagggagcctggactctagtctcc
aaccccttctgtccagagcctagtccccatcaagacccatttctccctggtgcctcagcc
cctaaggtctgggcccagggccgcctccaggggctgggatccattcattcccgcactaac
ctaatggaggctgagcttctggatgcagactcggacttctga
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