Arvicola amphibius (Eurasian water vole): 119807551
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Entry
119807551 CDS
T08327
Symbol
Sptbn1
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04517
IgSF CAM signaling
aamp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119807551 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119807551 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119807551 (Sptbn1)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119807551 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
119807551 (Sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
119807551
NCBI-ProteinID:
XP_038175500
LinkDB
All DBs
Position
1:complement(91963428..92090804)
Genome browser
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQAVQAMFNNRWDVDDWDNETASARLFERSRIKALADEREAVQKKT
FTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDAL
LLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFN
LAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIE
TEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEK
GNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEK
LEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQ
AVVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLY
IMDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGE
GYKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEK
ILSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERI
TYIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYST
QSLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTR
LRKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMN
NQASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQN
YHLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEA
EKLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLS
RTQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMF
LRQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPT
TLEGAEAAIKKQEDFMTTMDANEEKISAVVETGRRLVSDGNISSDRIQEKVDSIDDRHRK
NREAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAF
MAELASNKEWLDKIEKEGMQLISEKPETEAVVREKLTGLHKMWEVLESTTQTKAQRLFDA
NKAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEEL
QSQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEIL
WVGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLN
AEAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRGLVADSHPESERISMRQSKVDKL
YAGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQ
VKQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSM
VRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLA
RKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPY
LSSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRR
PPSPEPSTKVSEEAESQQWDTSKGDQVSQNGLPAEQGSPRMAETVETSGMVNGAAEQRTS
SKESSPIPSPTSDRKAKSALPAQSAATLPARTQETAAAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccagcaagcagtacaagcg
atgttcaacaaccgctgggatgtggatgactgggacaacgaaacagcctccgcacgcctc
ttcgagcggtcccgtatcaaggctctggcagatgagcgtgaagccgtacagaagaagacc
ttcaccaagtgggtcaactcccacctcgcccgagtgtcctgccgcatcacagacctgtac
accgacctccgagatggacggatgctcatcaagctgctggaggtcctctccggagagagg
ctgcctaaacccactaagggacggatgcgcatccactgtctggagaatgtagacaaggct
cttcagttcctgaaggagcagagagtccatcttgagaacatgggttcccatgacattgtg
gatgggaaccaccggctgaccctcggcctcatctggaccatcatcctgcgcttccagatc
caggacatcagtgtggagactgaggataacaaggagaaaaagtctgccaaggatgcgctg
ctgctgtggtgccagatgaagacagctgggtacccaaatgtcaacattcacaacttcacc
acgagctggagggatggcatggccttcaatgcactgatacacaaacaccggcctgacctg
atagattttgataaactgaagaaatccaatgcacactacaacctgcaaaatgcatttaac
ctggcagagcagcaccttggcctcactaagctgttagaccctgaagacatcagcgtggac
caccctgatgagaagtctatcatcacctatgtggtgacctactaccactacttctccaag
atgaaggccttggctgtggaagggaagcggattgggaaggtgcttgacaatgctattgag
acagagaagatgattgagaagtatgagtcccttgcctctgaccttctggagtggattgaa
caaaccatcatcatcctgaacaatcgcaagtttgctaattcgctggttggggtccagcag
cagcttcaggcgttcaacacttaccgcacagtggagaaaccacctaagttcacagagaag
gggaacttggaggtgctgcttttcacaattcagagcaagatgagagctaataatcagaag
gtctacatgccccgagaagggaagctcatctctgatatcaacaaggcctgggaaagactg
gaaaaagcagaacacgagcgagaactggcactgcggaatgagctcatacggcaggaaaaa
ctggaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacgtggctgagc
gaaaaccagcggctggtgtctcaggacaactttggatttgaccttcccgccgttgaggcc
gccaccaaaaagcacgaggccattgagacagacattgccgcgtatgaagagcgagtccag
gctgtggtggccgtggccagggaactcgaagccgagaactaccatgacatcaagcgcatt
acggcgaggaaggacaacgtcatccggctctgggaatacttgctggaattgctcagggcc
aggaggcagcgtcttgagatgaacctggggctgcaaaagatattccaggaaatgctttac
attatggactggatggacgaaatgaaggtgctattgctgtcccaagactacggcaaacac
ttgcttggtgtagaggacttgttacagaagcatgccctggttgaagccgacattgcaatc
caagcagagcgggtaagaggtgtgaacgcctctgcccagaagtttgcaacagacggggaa
ggctacaagccctgcgacccccaggtcatccgagaccgcgttgcccacatggagttctgc
tatcaggagctttgtcagctggcggcggaacgcagggcccgcctggaagagtcccgacgt
ctctggaagttcttctgggagatggcagaagaggaaggctggattcgggagaaggagaag
atcttgtcctctgacgattacgggaaagacctgaccagtgtcatgcgtctgctgagcaag
caccgggcgtttgaggatgagatgagcggccgcagtggccacttcgagcaggctattaaa
gaaggcgaagacatgatcgcagaggaacactttggatcagaaaagatccgcgaaagaatc
acttacatccgggaacagtgggccaacctggagcagctctcggccatacggaagaagcgc
ctggaggaggcctccctgctgcaccagttccaggccgatgcggacgacatcgatgcctgg
atgctggatatcctcaagatcgtctccagcaacgacgtgggccatgacgagtactccaca
cagtctctggtcaagaagcataaagacgtagccgaagagatcaccaactacaggcccact
attgacacgctccacgagcaagccagcgcccttccgcaggcacacgcggagtctccggac
gtgaggggccgcctggccggcatcgaggagcgctacaaggaggtggcggagctgacgcgg
ctgaggaagcaggctctgcaagataccctggccctgtacaagatgttcagcgaggccgat
gcctgcgagctctggatcgatgagaaggagcagtggctcaacaacatgcagatcccagag
aagctggaggacctggaagtcatccagcacaggtttgagagcctagaacctgaaatgaac
aaccaggcttcccgggttgctgtggtgaaccagattgcacggcagctgatgcacagtggc
caccccagtgaaaaggagatcagagctcagcaggataaactcaacacgaggtggagccag
ttccgagagctggtggacaggaaaaaggacgccctgctgtctgccctgagcatccagaac
taccacctcgagtgcaatgagaccaagtcctggatccgggaaaagaccaaggtcattgag
tctacccaagaccttggcaatgacctggcaggtgtcatggccctgcagcgcaagctgacc
ggcatggaacgagacctggtggccattgaggcaaaactgagcgacctgcagaaagaagcc
gagaagctggagtctgagcaccctgaccaggctcaagccatcctgtctcggctggccgag
atcagcgatgtgtgggaggagatgaagacgaccctgaagaaccgagaggcctccctggga
gaggccagcaaactgcagcagttcctgagggacttggatgacttccagtcttggctctcc
aggacccagactgccatcgcctcagaggacatgcccaacaccctgactgaggcagagaaa
cttctcacacagcatgagaacatcaaaaatgagattgacaattatgaggaagactaccag
aagatgcgggacatgggcgagatggtcacgcagggacagactgatgcgcagtacatgttt
ctgcggcagcggctgcaggccttagacacgggctggaacgagcttcataaaatgtgggag
aacagacagaaccttctctcccaatcccacgcctaccagcagttcctccgggacacgaaa
caagccgaagctttcctcaataaccaggagtatgttttggctcataccgaaatgcccact
accctggaaggagctgaagcagctattaagaagcaggaggacttcatgaccaccatggat
gccaacgaagagaagatcagcgctgtggtggagacgggccggaggctggtgagcgatggc
aacatcagctcggatcgcatccaggagaaagtggactctattgatgacagacacaggaag
aatagagaggcagccagtgaacttctgatgagattaaaggacaaccgagatctacagaaa
ttcctacaagactgtcaagagctgtccctctggatcaatgagaagatgctgaccgcccag
gacatgtcttacgatgaagccagaaacctgcacagtaaatggttaaagcatcaagcattt
atggcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcag
ctcatttcagagaagccagaaacagaagctgtggtgagggagaaactcactggtttacat
aaaatgtgggaagtccttgagtccaccacccagaccaaggcccagcggctcttcgatgca
aataaggctgagctgttcacacagagctgtgcagatctagacaaatggctccatggcctg
gagagccagattcagtctgacgactatggcaaagatcttaccagcgtcaatattctgctg
aaaaagcaacagatgctggagaatcagatggaagtgcggaagaaggagatcgaggagctc
cagagccaagcgcaggcactgagtcaggaggggaagagcaccgatgaggtggacagcaag
cgcctcaccgtgcagaccaagttcatggagctcctggagcccttgaatgagaggaagcac
aatctgttagcctccaaagagatccaccaattcaacagggatgtggaggacgaaatcctg
tgggttggtgagaggatgcctttggcaacgtccacagatcatggccataaccttcaaact
gtgcagctgttaataaagaaaaatcagaccctccagaaagaaatccaaggacaccagcct
cgtattgatgacatctttgagaggagccaaaacatcatcacagatagcagcagcctcaat
gctgaggctatcaggcagagactcgccgacctgaagcaactgtgggggctcctcattgag
gagacagagaaacgccatagacggctggaggaggcacacaaagcccagcagtactacttt
gatgcagctgaagcagaggcttggatgagtgaacaggaactgtacatgatgtctgaggaa
aaggccaaggatgagcagagtgctgtctccatgttgaaaaagcatcagattttggaacaa
gctgttgaggactatgcagagacagtacaccagctctccaagactagccggggcctggtg
gctgacagccatcccgaaagcgagcgtatcagcatgcggcagtcaaaagtggataagctg
tatgccggcctgaaggacctcgctgaagaaaggagaggaaaacttgacgagaggcacagg
ctcttccagctcaacagggaggtcgacgacctggaacagtggattgctgagagggaagtg
gtcgcagggtcacatgagttgggacaggactatgagcatgtcacgatgttacaagaacgg
ttccgagaatttgctcgagacaccggaaacattgggcaggagcgcgtggatacagtcaat
catatggcagatgacctcatcaactctggacattcagatgctgccaccattgctgagtgg
aaagacggtctcaatgaagcctgggctgacctcctagagctcattgacacgagaacacag
attctcgctgcctcctatgaactgcataagttttatcatgatgccaaggagatctttggc
cgcatccaggacaaacacaagaaactccctgaggagcttgggagagatcagaacactgtg
gagaccttacagagaatgcacaccacctttgagcatgacatccaggctctgggcactcag
gtgaagcagctgcaggaggacgcagcccgcctccaggcagcctacgcaggggacaaggct
gatgacatccagaaacgtgagaatgaggtcctggaagcctggaagtccctgctggatgct
tgtgagggtcgcagggtgcggctggtggacacgggagacaagttccgcttcttcagcatg
gtccgggacctcatgctctggatggaagatgttatccggcagatcgaggcccaggagaaa
ccacgggatgtgtcctctgttgaactgttaatgaataatcatcaaggtatcaaagctgag
attgatgctcgcaatgacagtttcacaacttgcattgaacttgggaaatccctgctggca
aggaaacactatgcttctgaggagatcaaggaaaagttactgcagttgacagaaaaaaga
aaagaaatgattgacaagtgggaagaccgatgggaatggctaagactgattttggaggtc
catcagttctcaagggatgccagtgtggcagaggcttggctgctcggacaggaaccatac
ctatccagccgcgaaattggccagagcgtggatgaagtggagaagctgatcaagcgccac
gaggcatttgaaaagtctgcagcgacctgggacgagagattctccgccctggagaggctg
accacattggagttactggaagtgcgcagacagcaagaggaagaagaaagaaagaggcgg
ccgccttctccggagccgagcacgaaggtttcagaggaggctgagtcccagcaatgggat
acttcaaaaggagaccaagtttcccagaatggtttgccagctgaacagggatctccacgg
atggcagaaaccgtggaaacaagtgggatggtcaacggtgctgccgagcagaggacgagc
tccaaagagtccagtcccattccctctcccacctctgaccgcaaggccaaatctgcactt
ccggcccagagtgctgccaccctgccagccaggacccaagagacagccgcggcccagatg
gaaggcttcctcaatcggaagcatgagtgggaggcccacaataagaaggcctcgagcagg
tcctggcacaatgtttattgcgtcataaataaccaggaaatgggcttctataaagacgcc
aagagtgctgcttctggcatcccctaccacagtgaggtccctgtgagtttgaaggaggct
gtctgcgaagtggcccttgattacaagaagaagaagcatgtgttcaagctaagactaaat
gatggcaacgagtacctcttccaagccaaagatgacgaggaaatgaacacatggatccag
gccatctcctctgccatctcctccgacaaacatgacctgtccgccagcacccagagtacg
ccagcatccagccgggcgcagaccttacccaccagcgtcgtcaccatcaccagcgagtct
agtcccggcaagagggagaaggacaaagagaaagacaaagagaagcggttcagccttttt
ggcaaaaagaagtga
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integrated database retrieval system
