Arvicola amphibius (Eurasian water vole): 119807597
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Entry
119807597 CDS
T08327
Symbol
Ddb1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03420
Nucleotide excision repair
aamp04120
Ubiquitin mediated proteolysis
aamp05161
Hepatitis B
aamp05170
Human immunodeficiency virus 1 infection
aamp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119807597 (Ddb1)
09124 Replication and repair
03420 Nucleotide excision repair
119807597 (Ddb1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119807597 (Ddb1)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
119807597 (Ddb1)
05161 Hepatitis B
119807597 (Ddb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119807597 (Ddb1)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119807597 (Ddb1)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
119807597 (Ddb1)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
119807597 (Ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
119807597 (Ddb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta_propel
Motif
Other DBs
NCBI-GeneID:
119807597
NCBI-ProteinID:
XP_038175571
LinkDB
All DBs
Position
1:153171352..153198638
Genome browser
AA seq
1146 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGENKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQGFFPPQDRIGR
PSETGIIGIIDPECRMIGLRLYDGLFKVIPLERDNKELKAFNIRLEELHVIDVKFLYGCQ
APTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQ
ESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGT
VTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFT
NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLR
SDPSRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSA
SVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEM
EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMT
TFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSD
RPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRT
VPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSS
TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA
MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT
TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM
SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVM
QNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWR
SFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVE
ELTRIH
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacgtcgtaacggcgcagaagcctaccgcagtgaacggctgtgtgacc
ggacactttacttctgcagaagatctgaacctgttgattgctaaaaatacgagattagag
atctatgtggtcactgcagaaggccttcggccagtcaaagaggttggcatgtatgggaag
attgcagtcatggaacttttcaggcccaagggggagaacaaagacctgctgttcatcttg
actgctaagtacaatgcctgcatcctggagtataagcagagtggcgaaagcattgatatc
attacaagagcccatggcaatgtccaggggtttttccccccacaggaccgtatcggtcgc
ccctcagagactggcatcattggtatcatcgaccctgagtgccgaatgattggcctgcga
ctctacgatggccttttcaaggtcattcccctggaaagagacaacaaagagctcaaggcc
tttaacatccgcctagaagagttgcacgtcattgatgtcaagttcctgtatggttgtcaa
gcacccaccatttgctttgtctaccaggatcctcaggggcggcatgtgaaaacctatgag
gtgtctctgcgagagaaggagttcaacaagggcccttggaaacaggagaatgtagaagct
gaagcttcaatggtgattgcagtcccagagccttttggaggtgccatcatcattggacag
gaatcaatcacgtaccataatggtgataaatacctggcaattgctcctcctatcatcaag
caaagcactattgtgtgccacaatcgggtggatcctaatggctcacgataccttctggga
gatatggaaggacggctcttcatgctgcttttagaaaaggaggagcagatggacggcact
gtcaccctcaaggatctccgagtagaactcctcggagagacctccattgcagagtgccta
acatacctcgataatggtgttgtatttgttgggtctcgcctaggtgactcccagcttgta
aagctcaatgtcgacagcaatgaacaaggctcttacgtagtggccatggaaacatttacc
aatttaggacccatcgtggatatgtgtgtggtggacctggagaggcagggacagggtcag
ctggtcacttgctctggggctttcaaggaaggttccttgcggatcatccggaacggaatt
ggaatccatgagcatgccagcattgacttaccaggcatcaaaggtttatggccactgcgg
tctgaccccagtcgggagactgatgacactttggtactctcttttgtgggccagacaaga
gttctcatgctaaatggagaggaagtggaagaaacagaactgatgggctttgtggatgat
cagcaaactttcttttgtggcaatgtggctcatcagcaacttatccagatcacttcagca
tctgtgaggttggtctctcaagagcccaaagctttggtcagcgagtggaaagagcctcag
ggcaagaacatcagtgtggcctcatgcaacagcagccaggtggttgttgctgtgggaagg
gcactgtactaccttcagatccatcctcaggagctccggcaaatcagccacacagagatg
gaacatgaagtggcttgcttggatatcaccccattaggggacagcaatgggctgtcccca
ctttgtgccattggcctctggacagacatctcagcccgtatcttgaagctcccatccttt
gaactactgcataaggagatgctaggaggagagatcattcctcgatctatcctgatgacc
acctttgagagtagccactatctcctctgtgccttgggagatggggctcttttctacttt
gggctcaacattgagacaggcttgctgagtgaccgtaaaaaggtgactttgggcacccag
cccacagtgttgaggacattccgttccctttctaccaccaacgtctttgcctgctctgat
cggcccactgtcatctatagcagcaaccacaagttggtcttctccaatgtcaacctcaaa
gaggtgaactatatgtgtcccctcaactcagatggctatcctgacagtctggcactggcc
aataacagcaccctcaccattggcaccatcgatgagatccagaaactccatattcgcaca
gttcctctctacgaatctcccaggaagatttgctatcaggaagtgtctcagtgctttggg
gtcctttccagccgcattgaagtccaagacactagtggaggcacaactgctttgaggccc
agtgccagcacccaggccctgtccagcagcgtcagctccagcaagctgttctctagcagt
actgctcctcacgagacctcgttcggagaagaggtggaggtgcacaacctcctcatcatt
gaccagcacacttttgaagtgcttcatgcccatcagtttctacaaaacgagtatgccctc
agcctggtctcctgcaagttgggcaaagaccccaacacatactttattgtgggcacagcc
atggtatatcctgaagaggcggagcctaagcagggtcgtattgtggtgttccagtattca
gatggaaaactgcagactgtggctgaaaaggaagtgaaaggggctgtgtactctatggtg
gagtttaatgggaagctgcttgccagcatcaacagcacggtgcggctctatgagtggacc
acagagaaggagctccgcactgagtgtaaccactacaacaacatcatggccctctacctg
aagaccaagggtgacttcatcctggtgggcgacctcatgcgctcagtgctgctacttgcc
tacaagcccatggaaggaaactttgaagagattgcccgagattttaatcccaactggatg
agtgcagtggaaatcttggatgatgacaatttcctgggagctgaaaatgcctttaacttg
tttgtgtgtcagaaggacagtgctgccaccactgatgaggagcggcagcacctgcaggag
gttggtctcttccacctgggcgagtttgtcaatgtgttctgccatggctccctagttatg
cagaatctgggcgagacttctacccctacacagggttcggtgctctttggcacagtcaac
ggcatgatagggctggtgacctcactgtcagagagctggtataacctcctgttggacatg
cagaaccgactcaataaggtcatcaaaagtgtgggcaagatcgaacactccttctggaga
tcctttcacactgagcggaagacagaaccagccacaggcttcatcgatggtgacctgatt
gagagtttcctagatatcagccgccccaagatgcaggaggttgtggcaaaccttcagtat
gatgatggcagtggtatgaagcgtgaagcaactgcagatgacctcatcaaagtcgtggag
gagctaactcggatccattag
DBGET
integrated database retrieval system
