Arvicola amphibius (Eurasian water vole): 119807608
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Entry
119807608 CDS
T08327
Symbol
Fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119807608 (Fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119807608 (Fip1l1)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119807608 (Fip1l1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
119807608
NCBI-ProteinID:
XP_038175637
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Position
1:complement(28789209..28852948)
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AA seq
559 aa
AA seq
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MSAGEVERLVELSSGTGGDEEEEWLYGGPWDVHVHSDLTKDLDENEVERPEEENASANPP
AGIEEEAAENGVSKPKVTETEEDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLN
IKAGGRVYGNTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFN
EDTWKAYCEKQKRIRMGLEVIPVTSTTNKITVQQGRTGNSEKEAALPSTKAEFTSPPSLF
KTGLPPSRNSTSSQSQTSTASRKASSSVGKWQDRYGRAESPDLSIGQTITISRVEGRRRA
NENSNIQVLSDRSAPEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPG
FPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNALWTPPSSGTIMHEERKTEIETEK
ETETERETETGTEKESAPERGSESGITAPRLAFSTVMRSGTDTGSMQKEAMSAIELVGKK
RSDTESDVTERKRKPDTSPLAVTVDVAMKVKKGTVTGDTSTKSLKEAKKEKRLAVSPSLN
RRVLKLPLLSRLHLLCLSV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtggagcgcctggtggagctgagcagcgggaccggaggggatgag
gaggaagagtggctgtatggcggcccctgggacgtgcatgtgcacagtgatttgacgaag
gatctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcctcca
gctggaattgaagaggaagctgctgaaaatggcgtgtcaaaaccgaaagtgactgagaca
gaagaggacagtgacagtgacagcgacgatgatgaggacgacgttcatgtcactatagga
gacattaaaaccggagcaccacagtatgggagttatggaacagcgccagtaaatcttaat
atcaaggcagggggaagagtgtatggaaatacaggaaccaaagtcaaaggggtagacctc
gatgcacctggcagcattaatggagtgccactcttggaagtagatttggattcttttgaa
gataaaccatggcggaaacctggtgctgatctttctgattattttaattacggctttaat
gaagacacttggaaagcttactgtgaaaaacagaagaggatccgaatgggacttgaagtt
ataccagttacttcaacaacaaataagatcacggtacaacaagggagaactggaaattca
gagaaagaagcagcgcttccatctacaaaagctgagtttacttctccgccatcattgttc
aagacgggcctgccaccaagcagaaacagcacctcttctcagtctcagacaagtactgcc
tccagaaaagccagttcaagcgttgggaagtggcaggatcgatatgggagggccgagtca
cctgatctaagtattggtcaaacaataaccatcagccgagtagaaggaagaaggcgggca
aatgaaaacagcaatatacaggtcctttctgacagatctgcccctgaagtggacaacaat
ttcagcaaaccgcctccatttttcccgccaggggctcctcctactcaccttccaccgcct
ccgtttcttccacctcctccaactgtcagcactgctcctcctctgatcccacctccaggt
ttccctcctccaccaggcgctccacctccatctcttataccaacaatagaaagtggccat
tcctctggttatgacagccgttctgcacgggcgttcccatacggcaatgccttgtggaca
ccaccaagcagtgggactattatgcacgaagagagaaagaccgagatcgagaccgagaaa
gagacagagaccgagagagagacagagaccgggacagagaaagagagcgcacccgagaga
gggagcgagagcgggatcacagccccacgcctagcgttttcaacagtgatgaggagcggt
accgatacagggagtatgcagaaagaggctatgagcgccatagagctagtcgggaaaaag
aggagcgacacagagagcgacgtcacagagagaaagaggaaaccagacacaagtcctctc
gcagtaacagtagacgtcgccatgaaagtgaagaaggggacagtcaccggagacacaagc
acaaaaagtctaaaagaagcaaagaaggaaaagaggctggcagtgagcccgtccctgaac
aggagagtgctgaagctgcccctgctgagtaggctccaccttttatgtttgtcggtctga
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