KEGG   Arvicola amphibius (Eurasian water vole): 119807737
Entry
119807737         CDS       T08327                                 
Symbol
Sdc1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04512  ECM-receptor interaction
aamp04514  Cell adhesion molecule (CAM) interaction
aamp04820  Cytoskeleton in muscle cells
aamp05144  Malaria
aamp05205  Proteoglycans in cancer
aamp05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119807737 (Sdc1)
   04514 Cell adhesion molecule (CAM) interaction
    119807737 (Sdc1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119807737 (Sdc1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    119807737 (Sdc1)
  09174 Infectious disease: parasitic
   05144 Malaria
    119807737 (Sdc1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    119807737 (Sdc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aamp04131]
    119807737 (Sdc1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:aamp04090]
    119807737 (Sdc1)
   00535 Proteoglycans [BR:aamp00535]
    119807737 (Sdc1)
Membrane trafficking [BR:aamp04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    119807737 (Sdc1)
CD molecules [BR:aamp04090]
 Proteins
  119807737 (Sdc1)
Proteoglycans [BR:aamp00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   119807737 (Sdc1)
SSDB
Motif
Pfam: Syndecan Glycophorin_A Romo1
Other DBs
NCBI-GeneID: 119807737
NCBI-ProteinID: XP_038175771
LinkDB
Position
2
AA seq 311 aa
MRRAALWLWLCALALRLQPILPQIVAVNVPPEDQDGSGDDSDNFSGSGAGALPDVTLSRQ
TSPTLKDVWLLTATPAAPEPTSRNAEAAFTSILSTVEKKPEEGEPVLVPVDTGLTARDKE
MEVTTRPRETTQLPITQRVSTVRATTAQAVTSHPHRDVQPDLHETLVPTAPGQPDHQPPS
ATEGGTSVVKEVVEDGATNQLPTGEGSGEQDFTFETSGENTAVAAIEPDQRNQQPVDEGA
TGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVAFMLYRMKKKDEGSYSLEEPKQANGGAY
QKPTKQEEFYA
NT seq 936 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctctggctctgcgcgttggcgctgcgcctgcagcctatc
ctcccgcaaatcgtggctgtaaacgtacctcctgaagatcaggatggctctggggacgac
tctgacaacttctctggctcaggcgcaggtgctttgccagacgtcactttgtcgcggcag
acttctcccactttgaaggatgtgtggctcctgacagccacacccgcagcaccagagccc
accagcaggaacgccgaggctgccttcacctccatcctgtcaactgtagagaagaagcct
gaggagggagagccagtgcttgtgccagtggacactggcctcaccgctcgggacaaggaa
atggaggtcaccaccaggcccagggagaccacacaactcccgatcacccaacgggtctca
acagtcagagccaccacagcccaggctgtcacgtctcatccccacagagatgtgcaacct
gacctccacgagaccttggttcccacagcacctggccagcctgaccatcaacctccaagt
gcaacagaaggaggtacttctgtcgtcaaagaagttgtcgaggatggagctaccaatcag
cttcctacaggggagggctctggagagcaggacttcacctttgaaacatctggggagaac
acagctgtggctgccatagagcctgaccaacggaatcagcagccagtggatgaaggagcc
acaggtgcctctcagggccttttggacaggaaggaagtgctgggaggtgtcatcgctgga
ggcctggtggggctcatctttgctgtgtgcctggtggctttcatgctgtaccggatgaag
aagaaggacgaaggcagctactccttggaggaacccaaacaagccaatggcggtgcctac
cagaaacccaccaagcaggaggagttctacgcctga

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